CcpA alignment

bglS_compl -------CCCCTTTCAT-----TGAAAGCGTTTTC-----TATGTTGATCT--------------
hutP_2_compl -------CCGCTCTTTT-----TGGAAGCGGTTTC-----AATTGCGGCTA--------------
yjmA ---AATGCTCGACCAAA-----TGAAAGCGTTATC-----AAATGTTGGCCTTTTC---------
glpF_compl -----TGTATCAGTGCA-----TGAAAGCGGTGTC-----AATCACTTTCCGTC-----------
mmgA -------AACTAGAAAT-----TGTAAGCGCTGTC-----TATCTTCTGAA--------------
ackA_2 -------CACCTCCCTT-----TGTAAGCGTTATC-----ATATTTTTGGA--------------
ackA_2 -------GACTTCTTAT-----TGTAAGCGTTATC-----AATACGCAAGT--------------
ydhO ---CCGCTTGTCGGACT-----TGGAAGCGGTATC-----ATTCCAACACTGATTG---------
yxjC ---TGCGGACAGGTTTT-----TGTAAACGCTTTC-----TAGTTCGCGGAAACGG---------
msmX_compl --ATCCCCCTTTGTTAT-----TGTAAACGCTTTC-----TTATATTGAGTGTAA----------
acoR --CTGCTTTTTTATTGT-----TGAAAGCGCTTTA-----TTTTTCCCCTACAATAGA-------
ydbH ---TTCCCCAGACTGTA-----TGAAAACGCTATC-----ATTCTAGTAAGAAAGA---------
licB -------TGAGTGTTTA-----TGAAAGCGATTTC-----ATAATATGATG--------------
gntR_2 -------CAGGTCTGAT-----TGAAAGCGGTACC-----ATTTTATCAGA--------------
gntR_1 ---GTTTCAGGTCTGAT-----TGAAAGCGGTACC-----ATTTTATCAGAAAATA---------
treP_compl --TGGAATAAAAATATC-----TGCAAGCGTTTTC-----ACAGCACGCTGCAAA----------
bglP -------ACACCAAAAA-----TGAAAGCGTTGAC-----ATCTCACGAAT--------------
amyE ---GTGATAATTTTAAA-----TGTAAGCGTTAAC-----AAAATTCTCCAGTCTTC--------
yobO ---TATAAAAACGTTAA-----TGTAAGCGGATTC-----ACAGCGATTGGTGATC---------
citM ---AAGGGAGAAAAAAA-----TGTAAGCGGATTC-----ATTTAAGGGGGAATGG---------
araA -------GATTCTTTCT-----TGAAAGCGTTTTA-----TATTAAAAGGA--------------
araA -------AATTATTTTT-----TGAAAGCGTTTTA-----TTCTTTATTCC--------------
acsA -------GGCATGAACT-----TGAAAGCGTTACC-----AGCAATAGAGG--------------
pta_1 AAAATAAGATTTTTTTA-----TGAAAGCGCTATA-----ATGAAAGTTGGCTGTTTGAA-----
lcfA ---GAAGGCAATAAAAA-----TGAAAACGTTATC-----AATAGTCGACCAGATT---------
kdgA ---TCCGAGCGAAATTA-----TGGAAGCGCTGAC-----ATTCGGTTTTACGACA---------
rbsR -------TGGTTAAAAA-----TGTAAACGGTTAC-----AAATCCAGAGG--------------
malA -ATGGTATAAATGGAAT-----TGTAAACGTTATC-----AAGGAGGTCGTCATATGA-------
iolB ---ATGACTGTGGGAAA-----TGAAAACGTTGTC-----ATCGTTCCTGCGGGAT---------
ccpC_compl -----TCGTTTAAATTA-----TGTATGCGCTTTC-----TTTTTTCACTCTGCCTA--------
dra_compl --AATGTCCGCTTTTTG-----TGTATGCGGTTTC-----AAAGCTGTATGATCA----------
mmsA ---TTTTTTGGTGTTTT-----TGAAAGCGTTTAA-----TTCTTGGCTTGCTGAAAAGT-----
araE -------AAGGTTTAAA-----TGAAAACGCTTTA-----CTCAACATTCG--------------
acuA -------TAAACCATGT-----TGAAAACGCTTTA-----TAATTTGGTATTCTTAAAGAAGGCATG---
acoA ---AAACAGACTAAAAA-----TGTAAGCGTTTGC-----TTTTTCGGGGACGGGG----------
galT ---CGAAACCGGCCGAA-----TGGAAGCGGATAC-----AGATACGTACCGTGAC----------
xylA -------TCAACTATTT-----TGGAAGCGCAAAC-----AAAGTGGTTTA------------------------
levD -------GAAATAACAA-----TGAAAACGCTTAA-----CACAACTGTGTT-----------------------
araB ---ATTAAATCCTTCAA-----TGAAAACGATTAC-----AAAGGACAAATTGTCA----------
citZ -----CAGCCAGTAAAA-----TGTAAGCATTTTC-----TTTTTGGGGGAGA---------------
yxkJ ---AACACACATGCAAT-----TGCAAACGGATAC-----AATTCACGAAGGGGTT----------
ackA_1 -------AACCGCAAAT-----TGTAAGCGTTCAT-----CAATACAAAACC-----------------------
pta_2 --AAGAAGAGTATGCTAGTAAA-----AGAAAGCGTTTTT-----GTAACTTTTTGAGGAGGTTT
hutP_1_compl -------CTAAAAATTC-----TGATAACTATTAA-----CTGAGTATTAT------------------------
xynC --CAAGTTAGTT-----TGTTTGATCAACA---AACTAATGAA------------------------------
xynC --AGAGAATGTA-----TGTTTGATCAACA---GGACTTTGGA------------------------------
Link to : Weight matrix