SigH

We searched for SigH binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for SigH.

Transcription Factor Regulated gene organism position cis-element score
SigH yvyD Bsu -63..-37 AGGAATTGTAAAGGGTAAAAGAGAAA 9.365090
SigH yvyD Bha -53..-27 AGGATTTACAAATGGGTATGTAGAAT 10.058710
SigH yvyD Pmu -57..-31 AGGATTATTCAACACAAGGGACAAAA 6.929890
SigH yvyD Syn -254..-280 AGGGTAGAGGTAAAGTTTTCCAGAAA 6.760070
SigH yvyD Aae -257..-231 AGGAAATGTTAATCCTTAAAGAAAAT 7.740850
SigH spoVS Bsu -157..-131 AGGAATATAGCAACTCCTTAGTGAAT 8.534850
SigH spoVS Bha -73..-48 AGGAATAAAGTCCTCAATCTCGAAA 9.352110
SigH spoVS Cac -100..-75 AGGAATTTTTTATTATATGTAGAAT 10.149190
SigH spoVS Sme -182..-157 AGGAGATGGCGCGCAGTCCCCAAAC 7.416690
SigH ftsA Bsu -170..-145 AGGATATACATAGGATATAACGAAT 10.953730
SigH ftsA Bha -119..-93 AGGAAACGGCACTTATTCTGTTGAAT 7.775710
SigH ftsA Cac -62..-37 AGGGAATTTTATTTTTGTGTTGAAT 8.247220
SigH ftsA Eco -42..-16 GGGAAATTGTGGGGCAAAGTGGGAAT 6.752640
SigH ftsA EcZ -42..-16 GGGAAATTGTGGGGCAAAGTGGGAAT 6.752640
SigH ftsA Ecs -42..-16 GGGAAATTGTGGGGCAAAGTGGGAAT 6.752640
SigH ftsA Rco -37..-63 AAGAATTACAAAGTAATGAGACGAAG 7.089120
SigH ftsA Nos -74..-100 AGGGAACTAATAATTAAATGACGAAT 8.181440
SigH minC Bsu -50..-25 AGGATTTTATCTTTTTTTGACGAAA 10.246230
SigH minC Bha -111..-85 AGGGAAACGAAATACCTGTGTGGAAT 7.368560
SigH minC Cac -108..-83 AGGATTTTACAAAATAATGTTGAAT 9.428970
SigH minC Sty 0..-25 AGGATTTCCTTATTTTTCCAAGTAT 7.262560
SigH citG Bsu -64..-39 AGGATTTTTTGTGTCATTGGCGAAT 11.030330
SigH citG jHp -148..-123 AAGAAAATCCTTGTTGCGAACGAAT 7.636430
SigH kinA Bsu -89..-63 AGGAGAATACTCATTTTCTAGCGAAT 9.947510
SigH kinA Bha -107..-132 AGGAAAACGGAAGGGTTGATCTAAT 7.727870
SigH kinA Cac -144..-170 AGGGGTTAACTTAAAAATTTTAGAAT 8.841460
SigH kinA Spn -117..-91 AGGAATGGCTATTTAACAATTCAAAA 6.762660
SigH kinA Mtu -1..-27 AGGAAAATCCTACAAATCCGGTGAAC 7.274570
SigH kinA MtC -1..-27 AGGAAAATCCTACAAATCCGGTGAAC 7.274570
SigH kinA Mle -175..-149 AGGGGATGCTTAGCCAGGACTGGAAC 7.057380
SigH kinA Eco -120..-95 AGGATGATAAATATCACGGGAGAAT 7.665470
SigH kinA EcZ -120..-95 AGGATGATAAATATCACGGGAGAAT 7.665470
SigH kinA Ecs -120..-95 AGGATGATAAATATCACGGGAGAAT 7.665470
SigH kinA Ype -249..-274 AGGAGTTGCGGCGTTTGTCGCTAAT 8.676970
SigH kinA Sty -267..-242 AGGAAATAATCGTTTTCTTTTAAAT 7.111110
SigH kinA Pae -19..-45 GGGATAGGAGTCTGAAGCGGGCGAAT 6.915270
SigH kinA Xfa -45..-70 AGGATATAGGCCAAACATCTCGACA 7.373480
SigH kinA Atu -181..-155 AGGACAATCATGCCAGAACGACGAAT 8.056920
SigH kinA Sme -188..-162 AGGAGATCGCCATGATGCCGACGATC 6.952280
SigH kinA Mlo -157..-131 AGGCTGTTCCGCAGCGTTCGTCGAAT 6.950390
SigH kinA Rco -51..-76 AGGAGTATTTTTTAGGTTAACTAAT 7.692370
SigH kinA Bbu -189..-163 AGGAAACACCTGTTATCATTCCGAAC 8.193390
SigH kinA Syn -153..-179 AGGATTCCCTAAAATACCTTATGAAA 6.977730
SigH kinA Nos -64..-90 AGGGATAAACTCTATTACCAAAGAAC 6.785280
SigH kinA Aae -91..-65 AGGAAATGTTTTAAATTAATGTTAAT 7.111110
SigH kinA Bsu -89..-63 AGGAGAATACTCATTTTCTAGCGAAT 9.947510
SigH kinA Bha -107..-132 AGGAAAACGGAAGGGTTGATCTAAT 7.727870
SigH kinA Cac -144..-170 AGGGGTTAACTTAAAAATTTTAGAAT 8.841460
SigH kinA Spn -117..-91 AGGAATGGCTATTTAACAATTCAAAA 6.762660
SigH kinA Mtu -1..-27 AGGAAAATCCTACAAATCCGGTGAAC 7.274570
SigH kinA MtC -1..-27 AGGAAAATCCTACAAATCCGGTGAAC 7.274570
SigH kinA Mle -175..-149 AGGGGATGCTTAGCCAGGACTGGAAC 7.057380
SigH kinA Eco -120..-95 AGGATGATAAATATCACGGGAGAAT 7.665470
SigH kinA EcZ -120..-95 AGGATGATAAATATCACGGGAGAAT 7.665470
SigH kinA Ecs -120..-95 AGGATGATAAATATCACGGGAGAAT 7.665470
SigH kinA Ype -249..-274 AGGAGTTGCGGCGTTTGTCGCTAAT 8.676970
SigH kinA Sty -267..-242 AGGAAATAATCGTTTTCTTTTAAAT 7.111110
SigH kinA Pae -19..-45 GGGATAGGAGTCTGAAGCGGGCGAAT 6.915270
SigH kinA Xfa -45..-70 AGGATATAGGCCAAACATCTCGACA 7.373480
SigH kinA Atu -181..-155 AGGACAATCATGCCAGAACGACGAAT 8.056920
SigH kinA Sme -188..-162 AGGAGATCGCCATGATGCCGACGATC 6.952280
SigH kinA Mlo -157..-131 AGGCTGTTCCGCAGCGTTCGTCGAAT 6.950390
SigH kinA Rco -51..-76 AGGAGTATTTTTTAGGTTAACTAAT 7.692370
SigH kinA Bbu -189..-163 AGGAAACACCTGTTATCATTCCGAAC 8.193390
SigH kinA Syn -153..-179 AGGATTCCCTAAAATACCTTATGAAA 6.977730
SigH kinA Nos -64..-90 AGGGATAAACTCTATTACCAAAGAAC 6.785280
SigH kinA Aae -91..-65 AGGAAATGTTTTAAATTAATGTTAAT 7.111110
SigH dnaG Cac -214..-189 AGGATTTTAAACATTTATCAAGAAT 10.058710
SigH spoIIAA Bsu -59..-34 ACGATATAATAGTGAAATAACGAAA 6.921490
SigH spoIIAA Bha -94..-68 AGGGATCATGCGTCCATAAACCGAAA 7.473940
SigH spoIIAA Cac -69..-44 AGGAAATTGGATAAGTTTATAGAAT 10.072590
SigH spoIIAA Atu -55..-81 AGGAGATCGACATAGCGATAGCGAGA 7.351860
SigH lytE Bsu -116..-141 AGGATTTCTCTCTGATGGAAAGACT 7.262560
SigH lytE Bha -74..-48 AGGAAATGCCCTTAAGTCTTAAGAAA 9.288490
SigH lytE Cac -155..-181 AAGATTTCATAAAAAGCTGTCCGAAA 7.823050
SigH lytE Lla -192..-218 AAGAGATTATATTTTGCTTTGCGAAA 7.724830
SigH lytE Mle -77..-52 ATGAAATAGCAGCCGATGCGCGAAA 7.011970
SigH lytE Eco -142..-167 AGGATAATCTACCGCCGAGGCAAAA 6.853290
SigH lytE EcZ -280..-254 AGGGGATAACGGTATGAGTAAAGAAT 8.764860
SigH lytE Ecs -280..-254 AGGGGATAACGGTATGAGTAAAGAAT 8.764860
SigH lytE Ype -71..-97 AGGATTTTAGTCGATATTGTGAGAAA 9.274610
SigH lytE Cpn -70..-44 AAGAAAAGTACCGAATTCACCCGAAA 6.852330
SigH lytE Bsu -116..-141 AGGATTTCTCTCTGATGGAAAGACT 7.262560
SigH lytE Bha -74..-48 AGGAAATGCCCTTAAGTCTTAAGAAA 9.288490
SigH lytE Cac -155..-181 AAGATTTCATAAAAAGCTGTCCGAAA 7.823050
SigH lytE Lla -192..-218 AAGAGATTATATTTTGCTTTGCGAAA 7.724830
SigH lytE Mle -77..-52 ATGAAATAGCAGCCGATGCGCGAAA 7.011970
SigH lytE Eco -142..-167 AGGATAATCTACCGCCGAGGCAAAA 6.853290
SigH lytE EcZ -280..-254 AGGGGATAACGGTATGAGTAAAGAAT 8.764860
SigH lytE Ecs -280..-254 AGGGGATAACGGTATGAGTAAAGAAT 8.764860
SigH lytE Ype -71..-97 AGGATTTTAGTCGATATTGTGAGAAA 9.274610
SigH lytE Cpn -70..-44 AAGAAAAGTACCGAATTCACCCGAAA 6.852330
SigH yoxA Bsu -65..-39 AGGAAATATGGTACAGTACATTGAAT 9.442850
SigH yoxA Bha -62..-36 AGGGTTTCAGTGTTCCAGTGTGGAAA 7.555180
SigH yoxA Nos -85..-60 AGGGATTATATATTTAGCTCTGAAC 7.140140
SigH yoxA Tma -187..-161 AGGATAGTTTGTGAAAAAATGAGAAA 7.955700
SigH spoVG Bsu -69..-44 AGGATTTCAGAAAAAATCGTGGAAT 9.534910
SigH spoVG Bha -70..-45 AGGAATATAGCCGGTCACCGAGAAC 7.980910
SigH spoVG Cac -79..-54 AGGATTATTATAAAATATAAAGAAT 9.074110
SigH spo0A Bsu -78..-53 AGGGTATATAGCGGTTTTGTCGAAT 9.758100
SigH spo0A Bha -175..-150 AGGAATAAATTCTTTGTAGTCAAAT 7.804470
SigH spo0A Cac -87..-62 AGGATAAATAATAGTTTTGTCGAAT 9.969130
SigH spo0A Ype -249..-274 AGGAGTTGCGGCGTTTGTCGCTAAT 8.676970
SigH spo0A Sty -267..-242 AGGAAATAATCGTTTTCTTTTAAAT 7.111110
SigH spo0A Xfa -45..-70 AGGATATAGGCCAAACATCTCGACA 7.373480
SigH spo0A Bme -172..-198 AGGATTTTTTTCAGCGATCATAAAAA 6.942870
SigH spo0A Ccr -20..-45 AGGGATTCGCGCCGTCTTCCAGAAC 7.769880
SigH spo0A Tpa -159..-134 AGGAGTAACCACCGAGGGCGAGAAA 8.268390
SigH spo0A Bbu -189..-163 AGGAAACACCTGTTATCATTCCGAAC 8.193390
SigH spo0A Syn -94..-119 AGGGGAGTTTTCTGGGCGGCAGAAT 7.522550
SigH spo0A Nos -111..-136 AGGATTAAAATCTTTACTACAAAAT 6.742370
SigH spo0F Bsu -78..-53 AGGGTATATAGCGGTTTTGTCGAAT 9.758100
SigH spo0F Bha -175..-150 AGGAATAAATTCTTTGTAGTCAAAT 7.804470
SigH spo0F Cac -87..-62 AGGATAAATAATAGTTTTGTCGAAT 9.969130
SigH spo0F Ype -249..-274 AGGAGTTGCGGCGTTTGTCGCTAAT 8.676970
SigH spo0F Sty -267..-242 AGGAAATAATCGTTTTCTTTTAAAT 7.111110
SigH spo0F Xfa -45..-70 AGGATATAGGCCAAACATCTCGACA 7.373480
SigH spo0F Bme -172..-198 AGGATTTTTTTCAGCGATCATAAAAA 6.942870
SigH spo0F Ccr -20..-45 AGGGATTCGCGCCGTCTTCCAGAAC 7.769880
SigH spo0F Tpa -159..-134 AGGAGTAACCACCGAGGGCGAGAAA 8.268390
SigH spo0F Bbu -189..-163 AGGAAACACCTGTTATCATTCCGAAC 8.193390
SigH spo0F Syn -94..-119 AGGGGAGTTTTCTGGGCGGCAGAAT 7.522550
SigH spo0F Nos -111..-136 AGGATTAAAATCTTTACTACAAAAT 6.742370
SigH ytxG Bsu -108..-83 AGGATTTTCTTACATAACGGAGAAT 10.058710
SigH ytxG Bha -101..-76 AGGAGATTAGAAAAAAACTGCGAAA 10.148010