Regulated Operon: ccpA-motPS

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ccpA alsA - 3044165..3045169
COG1609K ccpA-BAC ccpA-STA ccpA-STR  
ytxD motP - 3043284..3044102
COG1291N  
ytxE motS - 3042566..3043294
COG1360N  

Operon evidence: Northern blotting (2.7 kb transcript); downstream genes are on the opposite strand
Reference: Lapidus A, et al. (1997), Terahara N, et al. (2006), Genbank AF008220
Comments: The readthrough terminator downstream of ccpA leads to a 1.1 kb monocistronic ccpA transcript.

Promoters

No Data

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AAAAACGACCTCTTCGTAAAGGTCGTTTTTTACTTTGTTC
     >>>>>>        <<<<<<
3042560..3042579
-13..6
-9.1
 ytxE
AGAGCAAGCTTCACCTTTATGGTGAATTCTTGCTTTTTTCA
          >>>>>     <<<<<
3044131..3044145
20..34
-9.0
 ccpA

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai