Regulated Operon: ntdR

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yhjM ntdR + 1129715..1130704
COG1609K  

Operon evidence: Genome analysis; both sides are on the opposite strand
Reference: Inaoka T, et al. (2004)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
unknown Promoter -50:+10 1129584..1129643 TACCTGAAATCTTAACCTGTTTTTGCATGAACAGTACCTCCAATGATTTTATAATCTAAA Inaoka T, et al. (2004): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CACTACTGCCGCTGATTGAGCTCTTTTTGTCTTTTTTT
          >>>     <<<
1130933..1130943
229..239
-4.7
yhjM

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai