Regulated Operon: pgi-yugMN

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
pgi yugL - 3220731..3222083
COG0166G pgi-STA  
yugM
- 3220301..3220672

 
yugN
- 3219837..3220241

 

Operon evidence: Northern blotting (2.4 kb transcript)
Reference: Ludwig H, et al. (2001), Genbank Z93936
Comments: The readthrough terminator downstream of pgi leads to a 1.5 kb transcript. Genbank Z93936 lists two other potential terminators, one inside yugM and one downstream of yugM. Both lack a T-stretch.

Promoters

No Data

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TAAGAGGAGGGGAAAGCATCGGCCCCTCCTTTTTTTGTATGCCT
     >>>>>>>          <<<<<<<
3219771..3219794
43..66
-15.0
 yugN
AGAAAGCTGACTGGCATTTGCCGGTCGGCTTTTTATAAAATCAG
     >>>>>>>>>>    <<<<<<<<<<
3220698..3220721
10..33
-23.0
 pgi

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai