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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yclHI |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yclH | - | 424208..424888 | COG1136V | |||
| yclI | - | 424904..426364 | COG0577V |
| Operon evidence: | Co-regulated by YclJ, Genome analysis |
|---|---|
| Reference: | Ogura M, et al. (2008) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YclJ | Positive | -90:+1 | 426429..426518 | TTTTGCGTTTCACAATTGTTAGTTTTTATTTCATCAACTAGAAATAGATTGTTCATATTTTTTTCATACCTTTGGACTACTATTAATTTA |
Ogura M, et al. (2010): OV GS FT |
| SigA | Promoter | -50:+10 | 426420..426479 | AGAAATAGATTGTTCATATTTTTTTCATACCTTTGGACTACTATTAATTTATCAGCAAGG |
Ogura M, et al. (2010): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TATATAGAAGTGAACATAAAAAGAGCGGCGGCCGCATCCCCCCGCTCTTTTTATCATTTTTT >>>>>>>>> <<<<<<<< |
yclH |
|