Regulated Operon: yxaGH

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yxaG
- 4105268..4106281

 
yxaH
- 4104929..4106137
COG2311S  

Operon evidence: Northern blotting (2.5 kb transcript)
Reference: Yoshida K, et al. (2004), Yoshida K, et al. (2000)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
LmrA Negative ND 4107265..4107334 TCCTACAATTATATAGAACGGTCTAGACAAATGAATGATAATATATAGACTGGTCTAAATTGGAGGAAGC Yoshida K, et al. (2004): GS AR FT

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CAAAAGTCTAGATGCCTATTGGCGTCTAGACTTTTTTCTATTATTT
     >>>>>>>>>>>    <<<<<<<<<<<
4104909..4104934
-5..20
-19.5
yxaH

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai