Regulated Operon: yycFGHIJ-yyxA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yycF
- 4152719..4153426

yycF-BAC  
yycG
- 4150876..4152711

vicK-STA  
yycH
- 4149519..4150886

 
yycI
- 4149667..4150509
COG4853S  
yycJ
- 4148851..4149645
COG1235R yycJ-BAC  
yyxA yycK, yycK - 4146591..4147793

 

Operon evidence: Northern blotting (7.4 kb transcript); transcriptional fusions
Reference: Fabret C & Hoch JA (1998), Fukuchi K, et al. (2000), BSORF
Comments: Internal promoter in front of yyxA, leading to a 1.4 kb transcript. A shorter (2.4 kb) yycFG transcript was also detected.


Promoters

No Data

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAGCAGTCTGGCATCGTTGCCAGGCTGTTTTGATATGCAAAA
     >>>>>>>>>>    <<<<<<<<<<
4147537..4147560
-969..-946
-17.6
yyxA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai