Transcription factor: GlnR

Factor type MerR
SWISS-PROT ND
SubtiList ND
Consensus seq. TGTNA-------TNACA
Comment originally identified as a repressor of glnRA operon; binds to the same sequence with TnrA (activator)
Link to Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
glnRA glnR SigA Negative 1877877..1877893 -58:-42 TGTTAAGAATCCTTACA Gutowski JC, et al. (1992): DB FT
glnRA glnR SigA Negative 1877900..1877916 -35:-19 TGACACATAATATAACA Gutowski JC, et al. (1992): DB FT
nasA nasA SigA Negative 362838..362856 -58:-42 GTGTCACAAAAACTTACAC Nakano MM, et al. (1995): DP SDM
nasBCDEF nasB SigA Negative 362838..362856 -58:-42 GTGTAAGTTTTTGTGACAC Nakano MM, et al. (1995): DP SDM
ureABC ureA SigA Negative 3769925..3769941 +7:+23 TGTAAACTTTTATAACA Wray LV Jr, et al. (1997): DB DP PE
ureABC ureA SigA Negative 3770030..3770046 -99:-83 TGTGAATAAATATAACA Wray LV Jr, et al. (1997): DB DP PE




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai