List of Regulated Genes

These genes are classified according to the functional classification of their gene products by SubtiList.

 1 Cell envelope and cellular processes
 1.1 Cell wall
 1.2 Transport/binding proteins and lipoproteins
 1.3 Sensors (signal transduction)
 1.4 Membrane bioenergetics (electron transport chain and ATP synthase)
 1.5 Mobility and chemotaxis
 1.6 Protein secretion
 1.7 Cell division
 1.8 Sporulation
 1.9 Germination
 1.10 Transformation/competence
 2 Intermediary metabolism
 2.1 Metabolism of carbohydrates and related molecules
 2.1.1 Specific pathways
 2.1.2 Main glycolytic pathways
 2.1.3 TCA cycle
 2.2 Metabolism of amino acids and related molecules
 2.3 Metabolism of nucleotides and nucleic acids
 2.4 Metabolism of lipids
 2.5 Metabolism of coenzymes and prosthetic groups
 2.6 Metabolism of phosphate
 2.7 Metabolism of sulfur
 3 Information pathways
 3.1 DNA replication
 3.2 DNA restriction/modification and repair
 3.3 DNA recombination
 3.4 DNA packaging and segregation
 3.5 RNA synthesis
 3.5.1 Initiation
 3.5.2 Regulation
 3.5.3 Elongation
 3.5.4 Termination
 3.6 RNA modification
 3.7 Protein synthesis
 3.7.1 Ribosomal proteins
 3.7.2 Aminoacyl-tRNA synthetases
 3.7.3 Initiation
 3.7.4 Elongation
 3.7.5 Termination
 3.8 Protein modification
 3.9 Protein folding
 4 Other functions
 4.1 Adaptation to atypical conditions
 4.2 Detoxification
 4.3 Antibiotic production
 4.4 Phage-related functions
 4.5 Transposon and IS
 4.6 Miscellaneous
 5 Similar to unknown proteins
 5.1 From B. subtilis
 5.2 From other organisms
 6 No similarity
  Category not assigned


1 Cell envelope and cellular processes

1.1 Cell wall
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ywhE pbpG ywhE
2
2
  
ywtD ywtD
0
0
  
tuaA yvhA, yvhA tuaABCDEFGH
2
2
  
yrrR pbpI yrrRS
2
1
  

1.2 Transport/binding proteins and lipoproteins
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ycdH ycdHI-yceA
2
2
  
yfnI yetP, yetP yfnI
0
0
  
nrgA nrgAB ammonium transporter
2
2
  
yceA ycdHI-yceA
2
2
  
yjmB uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
appA appDFABC oligopeptide ABC transporter (oligopeptide-binding protein)
1
0
  

1.3 Sensors (signal transduction)
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yycG yycFGHIJ-yyxA
0
0
 vicK-STA  
yvqE liaS yvqIHGFEC
3
3
  
yccG yccG
0
0
  
yocF desK yocFG
0
0
  

1.4 Membrane bioenergetics (electron transport chain and ATP synthase)
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ykvV spoIVH, stoA ykvUV
3
2
  
ywjF ywjF-acdA-rpoE
2
3
 ywjF-BAC  

1.5 Mobility and chemotaxis

1.6 Protein secretion

1.7 Cell division

1.8 Sporulation
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yyaA thdF-gidAB-yyaA
1
2
 yyaA-BAC  
spoVAE spoVAABCDEF-lysA
2
1
  
soj spo0JA, spo0JA soj-spo0J chromosome partitioning protein; transcriptional regulator
1
0
 parA-MYC soj-BAC  
ytaA cotI ytaA
1
0
  
spo0J spo0JB, spo0JB soj-spo0J site-specific DNA-binding protein
1
0
  

1.9 Germination

1.10 Transformation/competence
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
smf smf DNA processing Smf protein homolog
1
2
 smf-STR smf-STR  

2 Intermediary metabolism

2.1 Metabolism of carbohydrates and related molecules

2.1.1 Specific pathways
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yvfC epsL eps
2
3
 yvfC-LAC  
yvfO yvfKLM-lacA-yvfO
1
0
  
pmi yvyI, yvyI pmi mannose-6-phosphate isomerase
1
1
 pmi-BAC pmi-BAC  
yveP epsF eps
2
3
  
yveT epsJ eps
2
3
  
yveB sacB-yveBA
6
4
  
yveO epsE eps
2
3
  
ycbF ycbCDEFGHJ
0
0
  
yqiQ mmgABCDE-yqiQ
2
2
 yqiQ-BAC  
lacA yvfN, yvfN yvfKLM-lacA-yvfO beta-galactosidase
1
0
 lacA-STR  
yoaJ yoaJ
1
1
  
idh iolG, iol, iol mmsA-iolBCDEF-idh-iolHI-fbaB myo-inositol 2-dehydrogenase
3
5
 idh-BAC idh-BAC  
yxiA yxiA
0
0
  
yfjS pdaA yfjS
1
0
 x0524-BAC  
yckE yckE
0
0
  
ysfD ysfD
0
0
  
ydjL ydjL
0
0
  

2.1.2 Main glycolytic pathways
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
fbaB iolJ, yxdI, yxdI mmsA-iolBCDEF-idh-iolHI-fbaB fructose-1,6-bisphosphate aldolase
3
5
 fbaA-BAC  

2.1.3 TCA cycle

2.2 Metabolism of amino acids and related molecules
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
goxB yjbR, yjbR tenAI-goxB-thiSGF-yjbV glycine oxidase
1
0
  
yvfD epsM eps
2
3
 yvjF-LAC  
yncD yncD
1
0
  
yvjB ctpB ctpB
2
1
  
rocF rocDEF arginase
4
4
 rocF-BAC  
yurP yurRQPONML
0
0
  
yurL yurRQPONML
0
0
  
yurG pucG yurHG
2
2
 yurG-BAC  
yrhA yrrT-mtn-yrhABC
2
2
 yrhA-BAC  
yusM yusMLKJ
3
2
 x1378-BAC  
nrgB nrgAB nitrogen-regulated PII-like protein
2
2
  
yccC ansZ yccC
2
2
  

2.3 Metabolism of nucleotides and nucleic acids
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
dra deoR-dra-nupC-pdp deoxyribose-phosphate aldolase
3
3
 dra-BAC-1 dra-BAC-2  
punA pnp, yqkO, yqkO drm-punA purine nucleoside phosphorylase
1
2
 punA-BAC punA-STR pnpA-BAC pnpA-STA pnpA-STR  
yurI yurI
1
0
  
yirY sbcD-yirY-yisB
1
0
  

2.4 Metabolism of lipids
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yusL yusMLKJ
3
2
 yusL-BAC  
yusJ yusMLKJ
3
2
 yusJ-BAC  
lip lipA, lipA lip lipase
0
0
 lipA-BAC lipA-STA lipA-BAC lipA-STA  
lipB yfiP, yfiP lipB esterase
0
0
  
yhdO yhdNO
2
2
  

2.5 Metabolism of coenzymes and prosthetic groups
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ybcP ybcQ, skfB, ybcQ skf
4
2
  
ribR ytnK, ytnK ytmIJKLMNO-ytnIJ-ribR-ytnLM riboflavin kinase
4
3
  
ribT ribD, ribD ypuE-ribDEAHT reductase
1
1
 ribD-STA ribG-BAC ribD-STA ribG-BAC  
ylnD cysHP-sat-cysC-ylnDEF
1
1
 cysG-BAC  
ylnF cysHP-sat-cysC-ylnDEF
1
1
  

2.6 Metabolism of phosphate

2.7 Metabolism of sulfur
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yvgR cysJ yvgRQ
2
2
  

3 Information pathways

3.1 DNA replication
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ssb yyaF-rpsF-ssb-rpsR single-strand DNA-binding protein
1
2
 ssb-BAC-1 ssb-BAC-2 ssb-OYP ssb-STA ssb-STR x1145-LAB  
ypcP ypcP
0
0
  
ywpH ywpH-glcR
1
2
  

3.2 DNA restriction/modification and repair

3.3 DNA recombination
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yrvE yrvE-apt
0
0
  

3.4 DNA packaging and segregation

3.5 RNA synthesis

3.5.1 Initiation
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
spoIVCB cisB, sigK, sigK spoIVCB-spoIIIC RNA polymerase sporulation-specific sigma factor (sigma-K) (N-terminal half)
4
7
 sigK-BAC sigK-BAC  
spoIIIC sigK, spoIVD, spoIVE, spoIVE spoIVCB-spoIIIC RNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)
4
7
 sigK-BAC sigK-BAC  

3.5.2 Regulation
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yacF pabBAC-sul-folBK-yazB-yacF-lysS
2
2
 x1602-BAC  
yrhI fatR yrhIJ
3
0
  
yycF yycFGHIJ-yyxA
0
0
 yycF-BAC  
yrhM sigV-yrhM
0
0
  
yofA yofA
0
0
  
yvqC liaR yvqIHGFEC
3
3
  
yvbA sdpR sdpRI
3
2
 x0133-BAC  
yrxA nadR nifS-yrxA
2
2
  
ysiA lcfA-ysiAB-etfBA
3
3
 ysiA-BAC  
yocG desR yocFG
0
0
 yocG-BAC  
ywfK ipa-89d, cysL, ipa-89d ywfK
2
2
  
yccH yccH
0
0
  

3.5.3 Elongation

3.5.4 Termination

3.6 RNA modification
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yacO gltX-cysES-yazC-yacOP
2
2
  

3.7 Protein synthesis

3.7.1 Ribosomal proteins

3.7.2 Aminoacyl-tRNA synthetases

3.7.3 Initiation

3.7.4 Elongation

3.7.5 Termination

3.8 Protein modification

3.9 Protein folding

4 Other functions

4.1 Adaptation to atypical conditions
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ywtB ywsC-ywtABC
0
0
  
yvfE epsN eps
2
3
  
yvtA yvtB, htrB, yvtB yvtA
1
0
  
yveR epsH eps
2
3
  
yveQ epsG eps
2
3
  
yveK epsA eps
2
3
  
yveN epsD eps
2
3
  
yveL epsB eps
2
3
  
yveM epsC eps
2
3
  
ywtA ywsC-ywtABC
0
0
  
yqhA yqhA
1
1
  
yyxA yycK, yycK yycFGHIJ-yyxA
0
0
  
ypqP ypqP
0
0
  
ywqD ywqCD
1
0
  
ywsC ywsC-ywtABC
0
0
  
rsbR ycxR, ycxR rsbRSTUVW-sigB-rsbX
2
2
  

4.2 Detoxification
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yrhJ yrhIJ
3
0
  
ydhU ydhU
1
1
  
yflM yflMK
0
0
  
ykzA yzzE, ohrB, yzzE ohrB
1
1
  
yaaJ yaaJ-scr
1
2
 x1387-BAC  

4.3 Antibiotic production

4.4 Phage-related functions

4.5 Transposon and IS

4.6 Miscellaneous
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
yrvO cymR-yrvO-trmU
1
1
 yrvO-BAC  

5 Similar to unknown proteins

5.1 From B. subtilis
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ybbM rsiW sigW-ybbM
2
2
  
yuiI yuiI
1
1
  
yvfF epsO eps
2
3
  
ykuG ykuFG
2
2
  
yvqF liaF yvqIHGFEC
3
3
 x0243-BAC  
yvqH liaH yvqIHGFEC
3
3
  
yvqG liaG yvqIHGFEC
3
3
  
yvaW sdpA sdp
3
0
  
yvaX sdpB sdp
3
0
  
yvaY sdpC sdp
3
0
  
yjcC spoVIF yjcB-yjcZ-spoVIF
2
4
 x1383-BAC  
yjbF yjbF
0
0
  
yfkB yfkABC
0
0
  
yxaG yxaGH
1
1
  
yfiE yfiDE
0
0
  
yycH yycFGHIJ-yyxA
0
0
  

5.2 From other organisms
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ybdE skfH skf
4
2
  
ykrU mtnU mtnU
1
1
  
ykrZ mtnZ, mtnD mtnWXBD
1
2
  
yazC gltX-cysES-yazC-yacOP
2
2
  
yveS epsI eps
2
3
  
ytqI ytqI
0
0
 ytqI-BAC ytqI-BAC  
ydcE ydcE
0
0
  
yqgZ yqgZ
1
1
  
ycsK ycsFGI-kipIAR-ycsK
3
0
  
ycbH ycbCDEFGHJ
0
0
  
ytaG ytaG
0
0
  
ylmF ylmDEFGH
1
0
  
yqeV lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV
3
6
  
yklA ohrA yklA
2
2
  
ypnP ypnP
0
0
  
ykmA ohrR ykmA
0
0
  
ylnE cysHP-sat-cysC-ylnDEF
1
1
  
yfjN yfjN
0
0
  
ytiP pbuO ytiP
1
1
  
ypuH ypuGHI
0
0
  
yxaA yxaAB
3
3
  
yfiD yfiDE
0
0
 yfiD-BAC  
yfiA glvR malA-yfiA-malP
3
2
 yfiA-STR  
yfiX yfiWX
0
0
  
ywbN ipa-29d, ipa-29d ywbLMN
3
3
  
ywbL ipa-27d, ipa-27d ywbLMN
3
3
  
ywbM ipa-28d, ipa-28d ywbLMN
3
3
  
yhdE nsrR yhdE
0
0
  

6 No similarity
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
ybcO skfA skf
4
2
  
ybcT skfD skf
4
2
  
ybcS skfC skf
4
2
  
yxbA yxaO, yxaO yxbBA-yxnB-asnH-yxaM
1
0
  
ywtC ywsC-ywtABC
0
0
  
yvfB epsK eps
2
3
  
yvfA epsK eps
2
3
  
yozR gerT yozR
2
1
  
yxiT yxiT
0
0
  
yfiW yfiWX
0
0
  
yvrI yvrI-yvrHa
1
0
  
yvqI liaI yvqIHGFEC
3
3
 yvqI-BAC  
yvaZ sdpI sdpRI
3
2
  
yfmH yfmH
0
0
  
ybdD skfG skf
4
2
  
yhaG trpP yhaG
2
2
  
ytlB ytlABCD
1
1
  
yjcB yjcB-yjcZ-spoVIF
2
4
  
yjbX cotO yjbX
1
1
  
yhcP yhcOP
2
2
  
yczA rtpA rtpA-ycbK
3
3
  
ypuC ypuBC
1
1
  
ypuE ypuE-ribDEAHT
1
1
  
ythC ythC
0
0
  
ykrI rsgI sigI-rsgI
1
1
  

Category not assigned
Gene Synonym Operon Description Num. of regulatory elements Num. of binding sequences Conserved groups
abrB cpsX abrB
3
4
 abrB-BAC-1 abrB-BAC-2 abrB-BAC-1 abrB-BAC-2  
speD ytcF gapB-speD
2
3
 speD-BAC  
speE ywhF speE-speB
1
1
 speE-BAC  
speB ywhG speE-speB
1
1
  
ybcL ybcL
0
0
  
gerPC yisF gerPABCDEF
2
1
 gerPC-BAC  
flhP yvyB usd-spoIIID-mbl-flhOP
1
1
  
ymxH ymxH
0
0
  
ywsB ywsB
0
0
  
ypwA ypwA
0
0
 ypwA-BAC ypwA-BAC  
yvyF yviB comFABC-yvyF-flgM-yvyG-flgKL
3
4
  
ypeQ ypeQ
0
0
  
yvyD yviI yvyD
3
2
  
yvyE yvhK yvyE-yvhJ
1
0
 yvyE-BAC  
yvyC yviH yvyC-fliDST
1
1
  
yxcD yxcED
0
0
  
yxcE yxcED
0
0
  
ypeB yzuA sleB-ypeB
1
1
  
upp ipc-35d upp
0
0
 upp-BAC upp-LAB upp-STA upp-STR upp-BAC upp-LAB upp-STA upp-STR  
mmgE yqiP mmgABCDE-yqiQ
2
2
 mmgE-BAC-1 mmgE-BAC-2  
mmgD yqiO mmgABCDE-yqiQ
2
2
 mmgD-BAC  
mmgC yqiN mmgABCDE-yqiQ
2
2
 x0817-BAC x0941-BAC  
mmgB yqiM mmgABCDE-yqiQ
2
2
  
mmgA yqiL mmgABCDE-yqiQ
2
2
 mmgA-BAC  
ydgH ydgGH
1
1
  
ydgB ydgBA-cotP
2
2
  
ydgA ydgBA-cotP
2
2
  
ydgG ydgGH
1
1
  
cheV cheV
1
1
  
cheW fla-che
3
3
 cheW-BAC-1 cheW-BAC-2  
yplQ yplQ
0
0
 x1301-BAC x1301-BAC  
xtmB ykxG xtmAB-xkdEFGHIJKM
1
0
  
xtmA ykxF xtmAB-xkdEFGHIJKM
1
0
  
cheY cheB fla-che
3
3
 x0812-BAC-1 x0812-BAC-2  
cheD ylxK fla-che
3
3
  
cheB cheL fla-che
3
3
  
cheA cheN fla-che
3
3
  
yacK ctsR-mcsAB-clpC-radA-yacK
3
3
  
yacN yacLMN
1
1
  
yacM yacLMN
1
1
  
yacL yacLMN
1
1
 yacL-BAC  
med yjaW med-comZ
2
2
  
gltX gltX-cysES-yazC-yacOP
2
2
 gltX-BAC gltX-STA gltX-STR  
gltR yrdL gltR
2
3
 x1300-BAC x1300-BAC  
patB patB
0
0
  
drm yqkN drm-punA
1
2
 deoB-STA  
gltC gltC
2
2
  
gltB gltAB
4
5
 gltB-STA x1459-BAC  
cspB cspB
2
2
 cspD-BAC cspD-LIS cspD-OCB cspD-STA-2 cspD-BAC cspD-LIS cspD-OCB cspD-STA-2  
ccpN ccpN-yqfL
1
0
  
murAA murA murAA
0
0
 murA-BAC murA-STA murA-BAC murA-STA murA-STR murA-BAC murA-STA  
ccpB yyaG exoA-ccpB
1
0
  
ccpC ykuM ykuJK-ykzF-ykuL-ccpC
4
3
  
maeN yufR maeN
2
2
 maeN-BAC maeN-BAC  
ywlF ipc-32d ywlFG
1
1
 lmo2662-BAC  
ywlG ipc-33d ywlFG
1
1
  
ywlB ipc-28d ywlB
0
0
  
fbaA fba fbaA-ywjH
0
0
 fbaA-BAC fbaA-STA fba-MYC  
yyaC yyaC
1
1
  
yyaB yyaB
0
0
  
yyaD yyaD
1
1
  
yyaF yyaF-rpsF-ssb-rpsR
1
2
 x0048-BAC  
yyaK yyaK
0
0
  
yyaL yyaL
0
0
  
yyaO yyaO
0
0
  
yyaS yyaTS
0
0
 x0446-BAC  
yyaT yyaTS
0
0
 yyaT-BAC  
yngH yngJIHGFE
1
1
  
era yqfH cdd-era
3
2
 era-STR  
yngJ yngJIHGFE
1
1
 x0639-BAC  
yngK yotA yngK
1
1
 yngK-BAC yngK-BAC  
yngE yngJIHGFE
1
1
 yngE-BAC  
yngF yngJIHGFE
1
1
  
yngG yngJIHGFE
1
1
 mvaB-BAC  
cypC ybdT cypC
0
0
  
argJ argE argCJBD-carAB-argF
3
4
 argJ-BAC argE-BAC  
eno cggR-gapA-pgk-tpiA-pgm-eno
2
3
 eno-BAC eno-MYC eno-STA eno-STR  
ytjP ytjP
0
0
  
yvjA yvjA-cccB
0
0
  
yvyG yviC comFABC-yvyF-flgM-yvyG-flgKL
3
4
  
gidA thdF-gidAB-yyaA
1
2
 gidA-BAC gidA-STR  
gidB thdF-gidAB-yyaA
1
2
 gidB-BAC gidB-STR  
argC argCJBD-carAB-argF
3
4
  
yorC yorBC
1
1
  
xpaC xpaC-yaaN
1
1
  
ysdA infC-rpmI-rplT-ysdA
2
2
  
citZ citA2 citZ-icd-mdh
3
5
 citZ-BAC citZ-STA  
yxbD yxaR yxbCD
2
0
  
yxbG yxaU yxbG
0
0
  
yxbF yxaT yxbF
0
0
  
yxbC yxaQ yxbCD
2
0
  
yxbB yxaP yxbBA-yxnB-asnH-yxaM
1
0
  
pfkA pfk pfkA-pyk-ytzA
0
0
 pfk-BAC pfk-BAC pfk-STA pfk-STR  
ykuP ykuNOP
2
3
  
ureC ureABC
5
5
  
yvdQ yvdQ
1
1
 x1284-BAC x1284-BAC  
gcvT yqhI gcvT-gcvPA-gcvPB
0
0
 gcvT-BAC gcvT-STA  
citH yxiQ citH
0
0
 citM-BAC mdh-BAC-2 citM-BAC mdh-BAC-2  
ftsE ftsEX
1
0
 ftsE-BAC ftsE-STR  
hemL hemK hemAXCDBL
2
3
 x0761-STA  
ftsA spoIIN ftsAZ
4
6
 ftsA-BAC-1 ftsA-BAC-2 ftsA-STA ftsA-STR  
ftsL yllD yllB-ylxA-ftsL-pbpB
0
0
 ftsL-STA  
zwf yqjJ zwf
0
0
  
ftsH ftsH
1
1
 ftsH-BAC ftsH-CLO ftsH-LAB ftsH-STA ftsH-STR ftsH-BAC ftsH-CLO ftsH-LAB ftsH-STA ftsH-STR  
ftsW ylaO ftsW-pycA
1
0
  
ftsZ ts-1 ftsAZ
4
6
 ftsZ-BAC ftsZ-CLO ftsZ-STA ftsZ-STR  
ftsY srb rnc-smc-ftsY
3
3
 ftsY-BAC  
ftsX ftsEX
1
0
  
mdh citH citZ-icd-mdh
3
5
 mdh-BAC-1 mdh-BAC-2 citM-BAC mdh-BAC-2  
rnhC ysgB rnhC
0
0
 rnhC-STA rnhC-STA  
ykuL ykuJK-ykzF-ykuL-ccpC
4
3
  
ksgA rnmV-ksgA
0
0
 ksgA-STR  
mdr bmr3 mdr
0
0
  
ligA yerG pcrBA-ligA-yerH
1
1
 ligA-BAC  
sleB ypeA sleB-ypeB
1
1
 sleB-BAC  
hemX hemAXCDBL
2
3
 hemX-STA  
hemY hemG hemEHY
0
0
 hemY-STA  
dgk yaaG dgk-dck
0
0
 dgk-BAC  
tetL tetLB
1
1
  
smc ylqA rnc-smc-ftsY
3
3
 x1416-OYP  
citM yflO citM-yflN
3
4
 citM-BAC  
pssA pss pssA-ybfM-psd
2
3
 x1012-BAC  
prfB secA-prfB
1
1
 prfB-STR  
etfA lcfA-ysiAB-etfBA
3
3
 etfA-BAC  
etfB lcfA-ysiAB-etfBA
3
3
 etfB-BAC x1559-CLO  
bmrU bmrU-bmr-bmrR
4
4
  
ybbB yzbC ybbB
1
1
  
ybbA feuABC-ybbA
3
4
  
bmrR bmrU-bmr-bmrR
4
4
  
ypvA ypvA
0
0
 ypvA-BAC ypvA-BAC  
accD yttI accDA
1
0
 accB-STA-1  
glyS yqfK glyQS
4
4
 x0027-CLO  
glyQ yqfJ glyQS
4
4
 glyQ-BAC glyQ-LAB glyQ-STR  
cotJA cotJABC-yesJK
2
2
 cotJA-BAC  
glyA ipc-34d glyA
4
2
 glyA-BAC glyA-STA glyA-BAC glyA-STA  
accC yqhX accBC-yqhY
0
0
 accC-BAC  
cotJB cotJABC-yesJK
2
2
  
pucA yurF pucABCDE
2
1
  
pucB yurE pucABCDE
2
1
  
pucC yurD pucABCDE
2
1
  
pucD yurC pucABCDE
2
1
  
pucE yurB pucABCDE
2
1
  
ahpF ndh ahpCF
2
2
 ahpF-BAC ahpF-STA  
pucH yunH pucH
2
2
  
pucJ yunJ pucRJKLM
3
3
  
pucK yunK pucRJKLM
3
3
  
pucL yunL pucRJKLM
3
3
  
pucM yunM pucRJKLM
3
3
  
pucR yunI pucRJKLM
3
3
  
pstBB yzmF pst
2
2
 pstBA-BAC  
pstBA yzmE pst
2
2
 pstBA-BAC  
treA treC trePAR
3
4
 treC-BAC  
spoIVCA cisA spoIVCA
2
3
  
treP treB trePAR
3
4
 treB-BAC  
treR yfxA trePAR
3
4
 treR-BAC  
ynxB ynaA ynxB
0
0
  
ydfO mhqO ydfO
1
1
  
ydfN mhqN mhqNOP
3
3
  
ydfI ydfHI
0
0
  
ydfH ydfHI
0
0
  
ydfK ydfK
2
1
 x0521-BAC x0521-BAC  
ydfJ ydfJ
2
2
  
cccB yvjA-cccB
0
0
  
ydfP mhqP mhqNOP
3
3
  
ydfS ydfS
1
1
  
ydfR ydfR
1
1
  
spoVAC spoVAABCDEF-lysA
2
1
 spoVAC-BAC  
spoVAB spoVAABCDEF-lysA
2
1
  
spoVAA spoVAABCDEF-lysA
2
1
  
spoVAF spoVAABCDEF-lysA
2
1
  
spoVAD spoVAABCDEF-lysA
2
1
 spoVAD-BAC  
pdhA aceA pdhABCD
1
2
 pdhA-BAC pdhA-STA aceA-BAC  
pdhB pdhABCD
1
2
  
pdhC pdhABCD
1
2
 pdhC-BAC  
pdhD citL pdhABCD
1
2
  
aprE sprE aprE
6
8
  
gmuR gmuBACDREFG
3
1
  
yflT yflT
0
0
 x1699-BAC x1699-BAC  
minC mreBCD-minCD
1
1
  
minD divIVB1 mreBCD-minCD
1
1
  
gmuC gmuBACDREFG
3
1
  
adhB yraGF-adhB-yraED
1
1
 adhB-BAC-1 adhB-BAC-2  
gmuA gmuBACDREFG
3
1
  
yjdB yjdB
1
1
  
gmuG gmuBACDREFG
3
1
  
gmuF gmuBACDREFG
3
1
  
gmuE gmuBACDREFG
3
1
  
gmuD gmuBACDREFG
3
1
  
yjdH yjdH
1
0
  
aprX aprX
2
2
  
yflP citST-yflP
0
0
  
yhfM yhfM
1
1
  
yhfL yhfL
2
2
 x0851-BAC x0851-BAC  
ymaA nrdI nrdIEF-ymaB
2
2
 ymaA-BAC nrdI-STA ymaA-BAC  
yhfN yzoA yhfN
0
0
  
flgK comFABC-yvyF-flgM-yvyG-flgKL
3
4
 x1601-BAC  
yacP gltX-cysES-yazC-yacOP
2
2
  
uxaA yjmJ uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
yhfQ yhfQ
1
1
  
trmU yrrA cymR-yrvO-trmU
1
1
 trmU-BAC trmU-MYC trmU-STR  
uxaB yjmI uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
yhfW yhfW
1
1
  
ycnD ycnED
0
0
  
ycnE ycnED
0
0
 x0398-BAC  
ycnB ycnCB
0
0
  
ycnC ycnCB
0
0
  
ywmF ywmF-csbD
1
1
  
ywmE ywmE
1
1
  
ywmC ywmC
0
0
  
ycnK ycnK
1
0
  
aldY yxkE aldY
1
1
  
aldX yxbE aldX
0
0
  
menD menBEC
1
3
  
menE menBEC
1
3
  
menF entC menBEC
1
3
 dhbC-BAC  
menA ipa-6d menA
0
0
  
menB menBEC
1
3
  
menC ytfD menBEC
1
3
  
dltD ipa-2r dltABCDE
3
3
 x0213-BAC  
ytwI ytwI
0
0
 ytwI-BAC ytwI-BAC  
yqiW yqiW
0
0
 yqiW-BAC yqiW-BAC  
ysaA ysaA
0
0
  
cheC ylxJ fla-che
3
3
  
phrK rapK-phrK
1
1
  
phrI rapI-phrI
2
2
  
phrC rapC-phrC
4
3
  
phrA gsiAB rapA-phrA
3
2
  
phrF ywhI rapF-phrF
2
1
  
phrG yycL rapG-phrG
3
3
  
phrE rapE-phrE
3
3
  
yoxA yoxA-dacC
2
2
  
yoxB yoxCB-yoaA
1
1
  
yoxC yoxCB-yoaA
1
1
  
yybN yybNMLKJ
1
0
  
yteJ sppA-yteJ
1
1
  
yteA yzwB yteA
1
1
  
yteV cse60 yteV
1
1
  
yviA sacU yviA
0
0
  
dctB ydbE dctB-ydbD
1
1
  
opuAA opuAABC
1
2
 opuAA-BAC-1 opuAA-BAC-2  
opuAB opuAABC
1
2
  
opuAC opuAABC
1
2
 x0189-BAC  
dctS ydbF dctSRP
3
2
  
dctR ydbG dctSRP
3
2
  
dctP ydbH dctSRP
3
2
  
ybaK ybxH ybaK-cwlD
3
3
  
ybaN ybxG ybaN
2
1
  
padR yfiO padR
0
0
  
ycbC ycbCDEFGHJ
0
0
 ycbC-BAC  
yxeP yxeKLMNOPQ
3
2
  
yxeQ yxeKLMNOPQ
3
2
  
yxeR yxeR-yxxB
0
0
  
ykrV mtnV mtnV
1
1
 ykrV-BAC  
yvgQ cysI yvgRQ
2
2
 x0164-BAC x0164-STA  
ykrX mtnX mtnWXBD
1
2
  
ykrY mtnY, mtnB mtnWXBD
1
2
  
braB braB
0
0
  
yxeB yxeB
1
1
 yxeB-BAC yxeB-BAC  
yxeC yxeC
0
0
  
yxeD yxeD
1
1
  
yxeE yxeE
2
2
  
yxeF yxeFGH
0
0
  
yxeG yxeFGH
0
0
  
yxeH yxeFGH
0
0
  
ywqO ywqO
0
0
  
yxeJ yxeIJ
0
0
  
yxeK yxeKLMNOPQ
3
2
  
yxeL yxeKLMNOPQ
3
2
  
lmrB yccA lmrAB
2
2
  
lmrA yccB lmrAB
2
2
  
yxeO yxeKLMNOPQ
3
2
 glnQ-BAC-3  
fnr narK-fnr
4
4
 x0456-BAC  
yczE yczE
0
0
  
yczJ yczJ
0
0
  
ypgR ypgR
0
0
  
ung ywdG ung
0
0
 ung-BAC-1 ung-BAC-2 ung-STA ung-STR ung-BAC-1 ung-BAC-2 ung-STA ung-STR  
yczH yczH
0
0
  
yvrH yvrI-yvrHa
1
0
  
yjbJ yjbJ
1
1
  
ydaD ydaDEFG
1
2
 yhdF-BAC-2 yhdF-BAC-3  
ydaF ydaDEFG
1
2
  
yrkC yrkC
1
1
  
ydaP ydaP
1
1
  
yaaH yaaH
1
1
  
ydaS ydaTS
1
2
 x0110-BAC-1 x0110-BAC-2  
ydaT ydaTS
1
2
  
yaaN xpaC-yaaN
1
1
  
yaaA yaaA-recF-yaaB-gyrB
1
2
 yaaA-BAC  
yaaB yaaA-recF-yaaB-gyrB
1
2
  
yaaE yaaDE
1
0
 yaaE-BAC  
yaaD yaaDE
1
0
 yaaD-BAC  
yflS yflS
1
1
  
lctP ycgC ldh-lctP
5
3
 lctP-STA lldP-1-BAC  
tnrA scgR tnrA
1
1
 tnrA-BAC tnrA-BAC  
abfA araABDLMNPQ-abfA
3
5
  
lepA yqeQ lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV
3
6
 lp_2015-LAB lp_2015-STA x0099-CLO  
mcsA yacH ctsR-mcsAB-clpC-radA-yacK
3
3
  
yunB yunB
1
1
  
mcsB yacI ctsR-mcsAB-clpC-radA-yacK
3
3
  
ywnJ ywnJ
3
3
  
glnH glnQHMP
1
1
 glnH-BAC  
glnM glnQHMP
1
1
 glnM-BAC  
ywnB ywnB
0
0
  
glnA glnRA
3
5
 glnA-BAC glnA-STA glnA-STR  
ywnF ywnF
0
0
  
glnR glnRA
3
5
 glnR-STA glnR-STR  
glnQ glnQHMP
1
1
 glnQ-BAC-1 glnQ-LAB glnQ-STR  
glnP glnQHMP
1
1
 glnM-BAC glnP-LAB glnP-STR-1 glnP-STR-2  
nin comJ nucA-nin
1
2
  
gltA gltAB
4
5
  
mmsA yxdA mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
 x1017-BAC  
amyX amyX
0
0
  
ylqB ylqB
1
1
  
ylqC rpsP-ylqC
0
0
  
epr ipa-15r epr
3
3
  
yneJ yoxI ccdA-yneIJ
1
3
 yneJ-BAC  
yneK yoxJ yneK
0
0
 x0714-BAC-1 x0714-BAC-1  
yneI yoxH ccdA-yneIJ
1
3
  
yneN yneN
0
0
  
trpC trpEDCFBA-hisC-tyrA-aroE
3
2
  
yneB yneAB-ynzC
2
5
 yneB-BAC  
yneA yneAB-ynzC
2
5
  
yneF yoxG yneEF
1
0
 yneF-BAC  
topA topI topA
0
0
 topA-BAC topA-LAB topA-STA topA-STR topA-BAC topA-LAB topA-STA topA-STR  
yneE yoxF yneEF
1
0
  
citG fumC citG
2
3
 fumC-BAC fumC-STA fumC-BAC fumC-STA fumC-BAC fumC-STA  
trpA trpEDCFBA-hisC-tyrA-aroE
3
2
  
trpF trpEDCFBA-hisC-tyrA-aroE
3
2
  
trpD trpEDCFBA-hisC-tyrA-aroE
3
2
  
trpE trpEDCFBA-hisC-tyrA-aroE
3
2
 x1522-STA  
hag hag
2
2
  
yvhJ yvyE-yvhJ
1
0
  
ptsG crr ptsGHI
2
2
 ptsG-BAC-1 ptsG-BAC-2 ptsG-STA ptsG-STR  
rnc rncS rnc-smc-ftsY
3
3
 rnc-BAC rnc-STA rnc-STR rnc-BAC rnc-STR  
yhgC yixC yhgC
0
0
 x1533-BAC x1533-BAC  
ccpA alsA ccpA-motPS
0
0
 ccpA-BAC ccpA-STA ccpA-STR  
araR yvbS araR
2
2
  
araP yseD araABDLMNPQ-abfA
3
5
  
araQ yseE araABDLMNPQ-abfA
3
5
  
tmrB tmrB
0
0
  
yrhB yrrT-mtn-yrhABC
2
2
  
araB araABDLMNPQ-abfA
3
5
  
araA araABDLMNPQ-abfA
3
5
  
araD araABDLMNPQ-abfA
3
5
 araD-BAC  
araE yvbR araE
3
4
  
araN yseC araABDLMNPQ-abfA
3
5
  
cgeC cgeBA cgeCDE
2
2
  
mcpA tlpA-mcpA
1
2
 mcpA-BAC-1 mcpA-BAC-2 mcpA-BAC-3 x0462-BAC  
araM yseB araABDLMNPQ-abfA
3
5
  
cgeB cgeAB cgeAB
3
6
  
mscL ywpC mscL
0
0
 mscL-BAC mscL-STA mscL-STR mscL-BAC mscL-STA mscL-STR  
fruR fruRKA
2
0
  
ytvI ytvI
1
1
  
cgeD cgeBB cgeCDE
2
2
  
fruK fruB fruRKA
2
0
  
yxdJ yxdJK
0
0
 x0129-BAC-2  
bkdAB bkd ptb-bcd-buk-lpdV-bkdAABB
4
4
 bkdAB-BAC  
deaD yxiN yxiM-deaD
0
0
 x0363-BAC ydbR-BAC  
icd citC citZ-icd-mdh
3
5
 citC-BAC citC-STA citC-BAC citC-STA  
yrvD yrvD
1
1
  
yrvJ yrvJ
0
0
  
yrvI relA-yrvI
1
1
 x0984-BAC  
acoL yfjH acoABCL
3
3
 acoL-BAC  
acoA yfjK acoABCL
3
3
 acoA-BAC acoA-STR  
acoC yfjI acoABCL
3
3
 acoC-BAC acoC-STR  
ribH ypuE-ribDEAHT
1
1
 ribH-BAC-1 ribH-BAC-2 ribH-STA  
ribA ypuE-ribDEAHT
1
1
 ribA-BAC ribA-STA  
acoR yzcB acoR-sspH
2
2
 x0536-BAC  
ribE ribB ypuE-ribDEAHT
1
1
  
ribD ribG ypuE-ribDEAHT
1
1
 ribD-STA ribG-BAC ribG-BAC  
yqjH yqjHI
0
0
  
yqjI yqjHI
0
0
 gnd-BAC  
pheA pheBA
0
0
  
yqjK yqjK
0
0
 yqjK-BAC yqjK-BAC  
yqjL yqjL
3
2
  
yqjM yqjM
0
0
 yqjM-BAC yqjM-BAC  
yqjN yqjN
0
0
  
obg spo0B-obg
1
1
  
yqjG yqjG
0
0
  
yqjX yqjWX
1
2
  
yqjY yqjYZ-yqkABC
0
0
  
yqjZ yqjYZ-yqkABC
0
0
  
araL yseA araABDLMNPQ-abfA
3
5
  
pheT pheT
0
0
 pheS-LAB pheT-BAC pheT-CLO pheS-LAB pheT-BAC pheT-CLO  
yqjP yqjPQ-dsdA-coaA-yqjT
0
0
  
yqjQ yqjPQ-dsdA-coaA-yqjT
0
0
  
yqjT yqjPQ-dsdA-coaA-yqjT
0
0
  
yqjU yqjVU
0
0
  
yqjV yqjVU
0
0
  
yqjW yqjWX
1
2
  
mbl usd-spoIIID-mbl-flhOP
1
1
 mreB-BAC mreB-LIS  
yrdK azlBCD-brnQ-yrdK
1
0
  
opuD ytfQ opuD
0
0
 opuD-STA x0813-BAC opuD-STA x0813-BAC  
opuE yerK opuE
2
2
 x0883-BAC x0883-BAC  
secA ts-341 secA-prfB
1
1
 secA-BAC-1 secA-BAC-2 secA-CLO secA-STR  
relA relA-yrvI
1
1
 relA-BAC relA-STA x0420-CLO  
mtrA mtrAB
1
1
 mtrA-BAC  
mtrB TRAP mtrAB
1
1
  
pckA ppc pckA
2
2
 pckA-BAC pckA-STA ppc-STR pckA-BAC pckA-STA  
yvfG yvfG
0
0
  
mtn mtnN, yrrU yrrT-mtn-yrhABC
2
2
 mtn-BAC pfs-STA  
gcaD tms26 gcaD-prs-ctc
2
2
 gcaD-BAC  
mta ywnD mta
2
2
 mta-BAC mta-BAC  
luxS ytjB luxS
0
0
 luxS-BAC luxS-STA luxS-STR luxS-BAC luxS-STA luxS-STR  
dacB dacB-spmAB
1
1
  
dacC pbp yoxA-dacC
2
2
  
tpiA tim cggR-gapA-pgk-tpiA-pgm-eno
2
3
 tpi-BAC tpi-LAB tpi-STA tpi-STR  
dacF dacF-spoIIAAB-sigF
5
7
 dacF-BAC-1 dacF-BAC-2  
yxdK yxdJK
0
0
  
fruA fruRKA
2
0
 fruA-BAC  
ylpC fapR fapR-plsX-fabDG
2
2
 ylpC-BAC  
bkdAA bkd ptb-bcd-buk-lpdV-bkdAABB
4
4
 x0194-BAC  
vpr ipa-45r vpr
2
1
  
mecA mecA
1
1
 mecA-STA mecA-STA  
tig yzzH tig
0
0
 tig-STA x0621-LAB tig-STA x0621-LAB  
yfjC yfjABCDEF
0
0
  
yxxG wapA-yxxG
3
3
  
yxxF yxxF
0
0
  
yxxE yxiD-yxxD-yxxE
0
0
  
yxxD yxiD-yxxD-yxxE
0
0
  
tuaF yvhF tuaABCDEFGH
2
2
  
tuaG yvhG tuaABCDEFGH
2
2
  
tuaD yvhD tuaABCDEFGH
2
2
  
tuaE yvhE tuaABCDEFGH
2
2
  
yvrP yvrPON
1
2
  
yttP yttP
2
0
  
xkdC ykxC xkdBCD-xtrA
1
2
  
rok ykuW rok
5
2
  
yerH pcrBA-ligA-yerH
1
1
  
yerB yerBC
1
0
  
yerC yerBC
1
0
  
yhjM ntdR ntdR
0
1
  
gerKC gerKACB
2
1
  
gerKA gerKACB
2
1
 gerKA-BAC  
yhjE yhjE-sipV
1
1
  
yhjD yhjD
1
1
  
yazB pabBAC-sul-folBK-yazB-yacF-lysS
2
2
  
dsdA yqjR yqjPQ-dsdA-coaA-yqjT
0
0
 dsdA-BAC  
yhjB yhjCB
1
2
  
veg veg
2
1
 x0312-BAC x0312-STA x0312-BAC x0312-STA  
yhjR yhjR
2
1
  
yndE yndDEF
1
1
  
yndD yndDEF
1
1
 yndD-BAC  
yndF yndDEF
1
1
  
yndA yndA
1
0
  
yndL yndL
1
1
  
yndN fosB yndN
1
1
 x0903-BAC  
yqcK arsR-yqcK-arsBC
2
2
 x1225-BAC  
yhxD yhxD
0
0
  
yhxC yhxC
1
0
 yhdF-BAC-3 yhdF-BAC-3  
yhxA yhxA-glpP
0
0
  
yyzE yyzE-bglA
0
0
  
mreB divIVB mreBCD-minCD
1
1
 mreB-BAC mreB-CLO mreB-LAB x0825-STA  
ywoD ywoD
0
0
  
ywoG ywoG
0
0
  
ywoF ywoF
0
0
  
rtpLP rtpA-ycbK rtpA leader peptide
3
3
  
uxaC yjmA uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
yobO yobO
1
1
  
addB addBA
2
3
 addB-BAC  
addA recE5 addBA
2
3
  
melA melA
0
0
  
sigA crsA yqxD-dnaG-sigA
5
7
 sigA-STA  
ezrA ytwP ezrA
1
2
 ezrA-STR ezrA-STR  
sigB rpoF rsbRSTUVW-sigB-rsbX
2
2
  
sigE spoIIGB spoIIGA-sigE-sigG
6
7
 sigE-BAC  
sigD flaB fla-che
3
3
 sigD-BAC  
sigG spoIIIG spoIIGA-sigE-sigG
6
7
 sigG-BAC  
sigF spoIIAC dacF-spoIIAAB-sigF
5
7
 sigF-BAC  
yqkC yqjYZ-yqkABC
0
0
  
sigH spo0H sigH
2
2
 sigH-BAC sigH-BAC sigH-BAC  
yqkA yqjYZ-yqkABC
0
0
 x0490-BAC yqkA-BAC  
sigM yhdM sigM-yhdLK
2
2
 sigM-BAC  
yqkF yqkF
0
0
 x1673-BAC x1673-BAC  
yqkE yqkE
0
0
  
yqkD yqkD
0
0
  
yodH yodHI
1
1
  
yodI yodHI
1
1
  
sigW ybbL sigW-ybbM
2
2
 x0624-BAC  
sigV sigV-yrhM
0
0
  
sigY yxlB sigY-yxlCDEFG
1
1
  
yodE mhqE mhqED
2
2
  
yodF yodF
1
1
  
yodC yodC
0
0
  
acoB yfjJ acoABCL
3
3
 acoB-BAC  
cysH cysHP-sat-cysC-ylnDEF
1
1
 cysH-BAC  
cysK cysK
2
2
 cysK-BAC-1 cysK-BAC-2 cysK-STA cysK-STR cysK-BAC-1 cysK-BAC-2 cysK-STA cysK-STR  
cysE cysA gltX-cysES-yazC-yacOP
2
2
 cysE-BAC-1 cysE-BAC-2 cysE-STA  
cysC ylnC cysHP-sat-cysC-ylnDEF
1
1
 cysC-BAC cysC-STA  
cysP ylnA cysHP-sat-cysC-ylnDEF
1
1
  
cysS snpA gltX-cysES-yazC-yacOP
2
2
  
yfiH yfiGHI
0
0
  
xynB ynaK xynPB
3
3
  
yozO yozO
1
1
  
yozL yozLK-yobH
1
2
  
yozM yozM
1
2
  
yozK yozLK-yobH
1
2
  
yycS yycS
0
0
  
yozQ yozQ
1
1
  
yycQ yycOPQ
0
0
  
hbs dbpA hbs
4
4
 hbs-BAC hbs-BAC  
yycP yycOPQ
0
0
  
ipi ipi
0
1
  
perR ygaG perR
2
3
 x0088-BAC x0088-BAC  
thrZ thrS2 thrZ-ywhA
2
4
 thrZ-BAC  
ppiB cypBS ppiB
1
1
 x0745-BAC x0745-BAC  
ytoI ytoI
0
0
 ytoI-BAC ytoI-BAC  
yxiS katE-yxiS
1
2
  
yxiD yxiD-yxxD-yxxE
0
0
  
yxiE bglPH-yxiE
3
3
  
ybgB ybgB
1
1
  
ybgE ybgE
1
0
 ywaA-BAC ywaA-BAC  
yxiB yxiB
0
0
  
ybgG ybgG
0
0
  
yxiM yxiM-deaD
0
0
  
ybgJ glsA ybgJ-ybgH
2
2
  
yxiO yxiO
0
0
  
yscB yscB
1
1
  
yveA sacB-yveBA
6
4
  
cah cah
0
0
  
yfiQ yfiQ
0
0
  
ypiP ypiP
0
0
  
purS yexA purEKBCSQLFMNHD
2
2
  
purR yabI purR-yabJ
1
1
 purR-BAC purR-STA  
purQ purEKBCSQLFMNHD
2
2
  
purT purT
1
1
  
leuD ilvBHC-leuABCD
5
5
  
msmX yxkG yxkF-msmX
1
1
 msmX-BAC  
purC purEKBCSQLFMNHD
2
2
 purC-BAC purC-STR  
purB purEKBCSQLFMNHD
2
2
 purB-STR  
ylaJ ylaJ
1
0
 x1575-BAC x1575-BAC  
trxA trx trxA
3
2
 trxA-BAC-1 trxA-BAC-2 trxA-STA trxA-BAC-1 trxA-BAC-1 trxA-BAC-2 trxA-STA  
purF purB purEKBCSQLFMNHD
2
2
 purB-STR  
purE purEKBCSQLFMNHD
2
2
 purE-BAC purE-STA purE-STR x1273-CLO  
purD purEKBCSQLFMNHD
2
2
 purD-BAC purD-STA purD-STR  
purK purEKBCSQLFMNHD
2
2
  
ylaA ylaABCD
3
2
  
ylaB ylaABCD
3
2
  
purH purJ purEKBCSQLFMNHD
2
2
 purH-BAC purH-STA purH-STR  
ylaD ylaABCD
3
2
  
purN purEKBCSQLFMNHD
2
2
  
purM purEKBCSQLFMNHD
2
2
 purM-BAC purM-STR  
purL purEKBCSQLFMNHD
2
2
 x0046-STR  
pheS pheST
3
3
 pheS-BAC pheS-LAB pheS-STA pheS-STR  
ydcC ydcC
1
1
  
ydcA ydcA
1
1
  
ysbB ysbB
0
0
 ysbB-BAC ysbB-BAC  
spoIIAA dacF-spoIIAAB-sigF
5
7
 spoIIAA-BAC  
cwlD ybaK-cwlD
3
3
 cwlD-BAC  
cwlC cwlC
1
1
  
cwlJ ycbQ cwlJ
1
1
 cwlJ-BAC-1 cwlJ-BAC-2 cwlJ-BAC-1 cwlJ-BAC-2  
cwlH yqeE cwlH
2
2
  
albA ywiA sboAX-albABCDEFG
4
1
  
sucC sucCD
0
0
 sucC-BAC sucC-STA  
sucD sucCD
0
0
 sucD-BAC sucD-STA  
htpG yxbB htpG
1
2
  
levG sacL levDEFG-sacC
3
4
  
mntC ytgC mntABCD
1
1
  
levE sacL levDEFG-sacC
3
4
  
levD sacL levDEFG-sacC
3
4
  
albB ywhR sboAX-albABCDEFG
4
1
  
uvrX yolE yolD-uvrX
1
2
  
albD ywhP sboAX-albABCDEFG
4
1
  
pcrA yerF pcrBA-ligA-yerH
1
1
 pcrA-BAC pcrA-STR  
uvrC uvrB uvrC
1
1
 uvrC-BAC uvrC-LAB uvrC-STR x0546-BAC uvrB-BAC uvrC-BAC uvrC-LAB uvrC-STR x0546-BAC  
uvrB uvrA uvrBA
1
1
 uvrB-BAC  
uvrA uvrBA
1
1
  
yulF yulF
0
0
  
spoVFA dpaA spoVFAB-asd-dapG-dapA
2
3
 spoVFA-BAC  
ywhA thrZ-ywhA
2
4
  
ywhH ywhH
0
0
  
bkdR yqiR bkdR
0
0
 bkdR-BAC bkdR-BAC  
lonB ysxF lonB
1
1
 lonB-BAC lonB-BAC  
rocR rocR
2
2
 rocR-BAC rocR-BAC  
rocD rocDEF
4
4
 rocD-BAC-1 rocD-BAC-2 rocD-STA  
rocE rocDEF
4
4
 x0901-BAC-1 x0901-BAC-2  
rocG ipa-75d rocG
3
3
 gudB-BAC gudB-BAC  
rocA ipa-76d rocABC
3
4
 x0155-BAC-1 x0155-STA  
rocB ipa-77d rocABC
3
4
 x0240-BAC  
rocC ipa-78d rocABC
3
4
 x0901-BAC-1  
spoVS spoVS
1
1
 spoVS-BAC spoVS-BAC  
lexA dinR lexA
1
3
 lexA-BAC lexA-CLO lexA-LAB lexA-STA lexA-BAC lexA-CLO lexA-LAB lexA-STA  
exoA exoA-ccpB
1
0
  
pabB pab pabBAC-sul-folBK-yazB-yacF-lysS
2
2
 pabB-BAC  
ycsE ycsE
0
0
  
ycsD ycsD
0
0
  
ycsG ycsH ycsFGI-kipIAR-ycsK
3
0
  
ycsF ycsFGI-kipIAR-ycsK
3
0
  
ycsA ycsA
0
0
  
ycsI ycsFGI-kipIAR-ycsK
3
0
  
ywzA ywzA
0
0
  
yqzH yqzH
1
2
  
yqzC yqzDC
1
0
  
yqzD yqzDC
1
0
  
yqzE comGABCDEFG-yqzE
3
3
  
yqzF yqzF
0
0
 yqzF-BAC yqzF-BAC  
yqzG yqzG
1
1
  
gtaB gtaB
2
2
 galU-STA galU-STA  
gapA gap cggR-gapA-pgk-tpiA-pgm-eno
2
3
 gapA-BAC-1 gapA-MYC-1 gapA-BAC-1 gapA-MYC-1 gapA-MYC-2 stu1788-STA stu1788-STR  
gapB gapB-speD
2
3
 gapA-BAC-2 stu1788-LAB  
yeaA ydjQ yeaA-ydjP-ydjO
1
1
  
nrdE nrdIEF-ymaB
2
2
 nrdE-MYC nrdE-STR  
nrdF nrdIEF-ymaB
2
2
 nrdF-MYC nrdF-STA nrdF-STR  
blt bmt blt-bltD
3
3
  
rbfA ylxO ylxS-nusA-ylxRQ-infB-ylxP-rbfA
1
1
 rbfA-BAC rbfA-STA x1021-STR  
ytfI ytfIJ
1
1
  
ytfJ ytfIJ
1
1
 ytfJ-BAC  
cotJC cotJABC-yesJK
2
2
 cotJC-BAC  
yesK cotJABC-yesJK
2
2
  
yesJ yfxD cotJABC-yesJK
2
2
  
yesF yfxB yesEF
0
0
  
yesE yeeL yesEF
0
0
  
argS argS
0
0
 argS-LAB argS-STR argS-LAB argS-STR  
yurQ yurRQPONML
0
0
  
yurR yurRQPONML
0
0
 x0835-BAC  
yurS sspG-yurS
2
3
  
yurH pucF yurHG
2
2
  
carB cpa argCJBD-carAB-argF
3
4
 carB-STR  
argB argCJBD-carAB-argF
3
4
  
argD argCJBD-carAB-argF
3
4
 argD-STA x1585-BAC  
argF argCJBD-carAB-argF
3
4
  
ilvH ilvN ilvBHC-leuABCD
5
5
  
ytpB ytpB
0
0
  
ysdB ysdB
1
1
  
yweA ipa-74d yweA
0
0
  
htrA ykdA htrA
3
2
 htrA-STR htrA-STR  
citR citR
1
1
  
citS yflR citST-yflP
0
0
 x0678-BAC x1262-BAC  
citT yflQ citST-yflP
0
0
  
yvdP cotQ yvdP
1
0
  
ykuK ykuJK-ykzF-ykuL-ccpC
4
3
  
ykuJ ykuJK-ykzF-ykuL-ccpC
4
3
  
gerPD yisE gerPABCDEF
2
1
  
ykuO ykuNOP
2
3
  
ykuN ykuNOP
2
3
  
divIVA ylmJ divIVA
1
0
 divIVA-BAC ypsB-BAC divIVA-BAC ypsB-BAC  
citA citA1 citA
2
1
  
citB citB
5
4
 citB-BAC citB-BAC  
ykuF ykuFG
2
2
  
ykuD ykuD
1
1
  
degQ sacQ degQ
3
2
  
degR prtR degR
2
1
  
degS sacU degSU
3
5
  
degU iep degSU
3
5
  
coaA yqjS yqjPQ-dsdA-coaA-yqjT
0
0
  
accA accDA
1
0
  
yphA csfD yphA-seaA
1
0
  
accB yqhW accBC-yqhY
0
0
 accB-STA-1 accB-STA-2 x1304-BAC  
yphP yphP
0
0
 x0480-BAC x0480-BAC  
serS serS
1
1
 serS-BAC serS-CLO serS-STR serS-BAC serS-CLO serS-STR  
serA serA
0
0
 serA-BAC x0383-BAC serA-BAC x0383-BAC  
dltA dae dltABCDE
3
3
 dltA-BAC dltA-STA  
dltB ipa-4r dltABCDE
3
3
  
dltC ipa-3r dltABCDE
3
3
 dltC-BAC dltC-LAB dltC-STA dltC-STR  
hemAT yhfV hemAT
1
1
  
dltE ipa-1r dltABCDE
3
3
  
ywtF ywtF
0
0
  
ywtG ywtG
1
1
  
yqhP yqhQP
2
2
  
yqhQ yqhQP
2
2
 yqhQ-BAC  
yqhY accBC-yqhY
0
0
 yqhY-BAC  
aroC aroC
0
0
 aroF-BAC-1 aroF-STA aroF-BAC-1 aroF-STA  
yqhB yqhB
1
1
 x0520-BAC-3 x0520-BAC-3  
xpt xpt-pbuX
2
2
 xprT-STA xpt-BAC  
ypzA ypzA
1
1
  
prs gcaD-prs-ctc
2
2
 prs-BAC prs-STA prs-STR-1 prs-STR-2  
sat ylnB cysHP-sat-cysC-ylnDEF
1
1
 sat-BAC  
licH celF licBCAH
3
2
  
licA celC licBCAH
3
2
 celC-BAC  
licB celA licBCAH
3
2
 x0802-BAC  
licC celB licBCAH
3
2
 licC-BAC x1227-BAC x1295-BAC  
licR celR licR
1
1
  
licT licT-bglS
4
3
 x0231-BAC  
gyrB novA yaaA-recF-yaaB-gyrB
1
2
 parE-BAC-1 parE-STR  
gyrA nalA gyrA
1
1
 gyrA-BAC gyrA-MYC gyrA-STA gyrA-STR gyrA-BAC gyrA-MYC gyrA-STA gyrA-STR  
brnQ yrdJ azlBCD-brnQ-yrdK
1
0
 brnQ-1-BAC brnQ-BAC-1 brnQ-BAC-2 brnQ-BAC-3 brnQ-BAC-4  
yvrO yvrPON
1
2
  
yvrN yvrM yvrPON
1
2
  
yvrE yvrE
1
1
  
ykgA ykgAB
1
1
  
ykgB ykgAB
1
1
 ykgB-BAC  
ctsR yacG ctsR-mcsAB-clpC-radA-yacK
3
3
 ctsR-BAC ctsR-STA ctsR-STR  
sigI ykoZ sigI-rsgI
1
1
  
ybfO ybfO
1
1
  
ybfM pssA-ybfM-psd
2
3
  
tkt tktA tkt
1
0
 tkt-BAC tkt-STA tkt-BAC tkt-STA  
scoA yxjD yxjC-scoAB-yxjF
2
2
  
hxlA yckG hxlAB
1
1
  
hxlB yckF hxlAB
1
1
  
leuB leuC ilvBHC-leuABCD
5
5
 leuB-BAC leuC-STA  
leuC ilvBHC-leuABCD
5
5
 leuC-STA  
sboX sboAX-albABCDEFG
4
1
  
leuA ilvBHC-leuABCD
5
5
 leuA-STA  
yxzE yxzE
2
2
  
yxzF yxlJ-yxzF
0
0
  
spoIIAB dacF-spoIIAAB-sigF
5
7
 x1348-CLO  
bkdB bkd ptb-bcd-buk-lpdV-bkdAABB
4
4
 bkdB-BAC  
asnO yucB asnO
2
1
 asnO-BAC x0747-BAC asnO-BAC x0747-BAC  
hxlR yckH hxlR
0
0
  
leuS leuS
1
1
 leuS-BAC leuS-STA leuS-STR leuS-BAC leuS-STA leuS-STR  
asnH yxaN yxbBA-yxnB-asnH-yxaM
1
0
  
asnB asn asnB-ytnA
0
0
 asnB-BAC x0918-STR  
seaA yphB yphA-seaA
1
0
  
sboA sbo sboAX-albABCDEFG
4
1
  
ydbM ydbM
1
1
  
yrhH yrhH
2
2
  
ydbO ydbO
0
0
  
ydbN ydbN
1
1
  
ydbA ydbA
0
0
  
spoVR spoVR
1
1
 spoVR-BAC spoVR-BAC  
ydbD dctB-ydbD
1
1
 x0221-BAC  
yrhC yrrT-mtn-yrhABC
2
2
  
spoVT yabL spoVT
2
1
 spoVT-BAC spoVT-BAC  
spoVK spoVJ spoVK
3
2
  
spoVM spoVM
2
1
  
spoVB spoIIIF spoVB
2
1
  
ydbS ydbST
1
1
 ydbS-BAC  
spoVG 0.4 kb gene spoVG
2
2
 spoVG-BAC spoVG-STA spoVG-BAC spoVG-STA  
ydbT ydbST
1
1
  
spoVE murE-mraY-murD-spoVE-murG-murB-divIB-ylxWX-sbp
3
5
 spoVE-BAC  
spoVD spoVD
2
3
 spoVD-BAC spoVD-BAC  
radC ysxA radC
2
2
 radC-BAC radC-BAC  
radA yacJ ctsR-mcsAB-clpC-radA-yacK
3
3
 radA-BAC  
hisC aroJ trpEDCFBA-hisC-tyrA-aroE
3
2
 x1197-BAC x1361-STA x1594-BAC  
yusV yusV
1
2
 fecE-BAC fecE-BAC  
yusK yusMLKJ
3
2
  
arfM ywiD arfM
3
2
  
yusE yusED
1
0
  
yusD yusED
1
0
  
yhzC yhzC
0
0
  
ycbJ ycbCDEFGHJ
0
0
  
comX comQX
1
1
  
comZ yjzA med-comZ
2
2
  
ycbL ycbLM
0
0
  
ycbM ycbLM
0
0
  
comQ comQX
1
1
  
comP comP
0
0
  
comS srfAA-srfAB-comS-srfAC-srfAD
4
5
  
ycbG ycbCDEFGHJ
0
0
  
ycbD ycbCDEFGHJ
0
0
 ycbD-BAC  
comK comK
8
6
 x1066-BAC x1066-BAC  
ycbR ycbR
0
0
  
comC comC
2
3
 comC-BAC comC-BAC  
ycbU ycbU
0
0
  
lytE cwlF lytE
3
2
  
lytD cwlG lytD
1
1
  
lytF yhdD lytF
1
1
  
lytA lppX lytABC
4
2
  
lytC cwlB lytABC
4
2
  
lytB cwbA lytABC
4
2
  
lytT lytT
0
0
  
lytR lytR
3
2
 x0089-BAC x0089-BAC  
iolR iolRS
2
3
  
iolS yxbF iolRS
2
3
  
iolD yxdD mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
  
iolE yxdE mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
 iolE-BAC  
iolF yxdF mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
  
iolB yxdB mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
  
iolC yxdC mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
 iolC-BAC-1 iolC-BAC-2  
antE antE
1
1
  
iolH yxdG mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
  
iolI yxdH mmsA-iolBCDEF-idh-iolHI-fbaB
3
5
  
pyrAA pyrRPBCAAABKDFE
3
5
  
nadA nadBCA
2
2
 nadA-BAC  
arsC yqcM arsR-yqcK-arsBC
2
2
 arsC-BAC arsC-STA  
ycbK rtpA-ycbK
3
3
  
bmr bmr1 bmrU-bmr-bmrR
4
4
  
ytaP ytaP
0
0
  
yotK yotK
1
1
  
nusB yqhZ nusB-folD
1
1
  
nusA ylxS-nusA-ylxRQ-infB-ylxP-rbfA
1
1
 nusA-BAC nusA-CLO nusA-LAB nusA-STA nusA-STR  
ytaB ytaB
0
0
  
glcU ycxE glcU-gdh
2
1
 x0378-BAC  
glcP yhjI ntdABC-glcP
2
1
  
glcR ywpI ywpH-glcR
1
2
  
pepT pepT
0
0
 pepT-STA pepT-STR pepT-STA pepT-STR  
ysgA ysgA
0
0
  
yxkF yxkF-msmX
1
1
  
yxkD yxkD
0
0
 yxkD-BAC yxkD-BAC  
yxkH yxkH
0
0
  
yxkI yxkI
0
0
  
yxkO yxkO
1
1
  
ytsJ ytsJ
0
0
 ytsJ-BAC-2 ytsJ-BAC-2  
kdgT kdgRKAT
3
2
  
yvcS yvcRS
1
0
  
kdgR kdgRKAT
3
2
  
comA comAA comA-yuxO
1
1
  
kdgK kdgRKAT
3
2
  
mrgA mrgA
2
2
  
kdgA kdgRKAT
3
2
  
ytsP ytsP
0
0
  
ssuD yzeC ssuBACD-ygaN
3
2
 ssuD-BAC  
ssuA yzeA ssuBACD-ygaN
3
2
 ssuA-BAC  
ssuC yzeB ssuBACD-ygaN
3
2
 ssuC-BAC  
ssuB ygaL ssuBACD-ygaN
3
2
 ssuB-BAC  
acdA ywjF-acdA-rpoE
2
3
 x0639-BAC x0817-BAC  
ykvI ykvI
1
1
 ykvI-BAC ykvI-BAC  
ykvT ykvT
1
1
  
ykvU ykvUV
3
2
  
ykvR ykvR
1
1
  
ykvP ykvPQ
1
0
  
ykvQ ykvPQ
1
0
  
ypkP ypkP
0
0
  
lcfA lcfA-ysiAB-etfBA
3
3
 lcfA-BAC  
yitG yitGF
1
1
  
spmB ypuK dacB-spmAB
1
1
  
yitD yitCD
2
2
  
spmA ypuJ dacB-spmAB
1
1
  
yfkM yfkM
1
1
  
spoIVFA spoVL spoIVFAB
2
1
  
spoIVFB spoIVFAB
2
1
  
gdh glcU-gdh
2
1
 gdH-BAC  
ytmO ytmIJKLMNO-ytnIJ-ribR-ytnLM
4
3
  
resB ypxB resABCDE
3
4
  
resC ypxC resABCDE
3
4
 resC-BAC  
resA ypxA resABCDE
3
4
  
resD ypxD resABCDE
3
4
 resD-BAC-1 resD-BAC-2  
resE ypxE resABCDE
3
4
  
psd pssA-ybfM-psd
2
3
  
ypmT ypmT
0
0
  
rnmV yabF rnmV-ksgA
0
0
 rnmV-BAC  
bceR bceRS
0
0
  
bceS bceRS
0
0
  
yufN yufN
0
0
  
bceB bceAB
2
2
  
bceA bceAB
2
2
  
fliL fla-che
3
3
  
safA yrbA safA-coxA
1
1
  
yxxB yxeR-yxxB
0
0
  
yfiG yfiGHI
0
0
  
ywjH fbaA-ywjH
0
0
 ywjH-BAC  
ywjI ywjI
0
0
 x0577-BAC-1 x0577-BAC-1  
cydA yxkK cydABCD
4
6
 cbdA-STA cydA-BAC  
cydB yxkL cydABCD
4
6
  
cydC yxkM cydABCD
4
6
  
cydD yxkN cydABCD
4
6
  
ywjC ywjC
1
1
  
yccK yzaE yccK
0
0
  
csfC S transcription unit csfC
1
1
  
groEL groESL
2
2
 groEL-BAC groEL-STA  
spsL ipa-73d sps
1
1
  
spsI ipa-71d sps
1
1
  
spsJ ipa-72d sps
1
1
 rfbB-BAC  
groES groESL
2
2
 groES-BAC groES-STA  
spsD ipa-66d sps
1
1
  
spsE ipa-67d sps
1
1
  
spsF ipa-68d sps
1
1
  
spsG spsH sps
1
1
  
spsA ipa-63d sps
1
1
  
spsB ipa-64d sps
1
1
 spsB-STA  
spsC ipa-65d sps
1
1
  
ybyB ybyB
0
0
  
tlpA tlpA-mcpA
1
2
 mcpA-BAC-2  
tlpB tlpB
1
1
 mcpA-BAC-2 mcpA-BAC-2  
tlpC tlpC
1
1
  
yttB yttB
0
0
  
yttA yttA
1
1
  
nasF nasBE nasBCDEF
7
7
  
yoaW G4 yoaW
2
1
  
yycO yycOPQ
0
0
  
yjoB yjoB
1
1
  
nasD nirB nasBCDEF
7
7
 nirB-BAC  
nasE nirD nasBCDEF
7
7
  
rsiX ypuN sigX-rsiX
3
2
  
fliK fla-che
3
3
  
ywdA ipa-51d sacPA-ywdA
3
3
  
ywdL gerQ, ipa-62r ywdL
1
1
  
ymaG ymaG
1
0
  
ywdH ipa-58r ywdH
0
0
 x0897-BAC x0897-BAC  
ywdI ipa-59d ywdIJK
1
1
  
ywdJ ipa-60d ywdIJK
1
1
  
ywdK ipa-61d ywdIJK
1
1
 x0444-BAC  
yqxD yqfM yqxD-dnaG-sigA
5
7
  
pyrD pyrDI pyrRPBCAAABKDFE
3
5
 pyrD-STA pyrD-STR  
yqxC yqiF yqxC
0
0
  
yqxA yqeP spoIIP-yqxA
2
1
  
yqxL yqhC yqxL
2
2
  
yqxM yqhD yqxM-sipW-tasA
3
3
  
yqxJ yqdF yqxIJ
1
0
  
yqxI yqdE yqxIJ
1
0
  
fliJ cheF fla-che
3
3
  
kapB kinB-kapB
2
2
 kapB-STA  
yqiG yqiG
0
0
  
spo0E spo0E
2
2
  
ccdA ccdA-yneIJ
1
3
 ccdA-BAC x0550-BAC  
yycC yycCB
1
1
  
ytrI ytrHI
1
1
  
ytrH ytrHI
1
1
  
ygaO ygaO
1
0
  
ygaN ssuBACD-ygaN
3
2
  
ytrA ytrABCDEF
2
1
  
ytrC ytrABCDEF
2
1
  
ytrB ytrABCDEF
2
1
  
ytrE ytrABCDEF
2
1
  
ytrD ytrABCDEF
2
1
  
ytrF ytrABCDEF
2
1
  
yycB yycCB
1
1
  
ytrP ytrP
0
0
  
ypjQ ypjQ
0
0
  
fbp yydE fbp
1
1
 x0209-STR x0209-STR  
pbuG yebB pbuG
1
1
 pbuG-BAC pbuG-BAC  
pbuX ypaQ xpt-pbuX
2
2
  
ypjB ypjB
2
1
  
lysA spoVAABCDEF-lysA
2
1
 lysA-BAC  
lysC aecA lysC
1
1
 x1019-STR x1019-STR  
adaA adaAB
2
1
  
adaB adaAB
2
1
  
lysS pabBAC-sul-folBK-yazB-yacF-lysS
2
2
 lysS-BAC-1 lysS-BAC-2  
acsA acsA
3
2
 acsA-BAC acsA-STA acsA-BAC acsA-STA  
yqfY yqfZY
2
1
 yqfY-BAC  
yqfZ yqfZY
2
1
  
yqfU yqfSU
1
1
 x0569-BAC yqfU-BAC  
ansR ansR
1
0
 ansR-BAC ansR-BAC  
yqfQ yqfQ
1
0
  
yqfS nfo yqfSU
1
1
  
yqfL ccpN-yqfL
1
0
 yqfL-BAC  
yqfD yqfCD
2
1
  
ansA ansAB
2
1
 ansA-BAC ansA-STA  
ansB ansAB
2
1
 ansB-BAC-1 ansB-BAC-2 x0918-STR  
yqfA yqeZ-yqfA-yqfB
1
1
 yqfA-BAC  
yqfB yqeZ-yqfA-yqfB
1
1
  
yqfC yqfCD
2
1
  
ald spoVN ald
1
1
 x0120-BAC-1 x0120-BAC-2 x0120-STA x0120-BAC-1 x0120-BAC-2 x0120-STA  
ptb bkd ptb-bcd-buk-lpdV-bkdAABB
4
4
 x0587-CLO  
pta ywfJ pta
2
3
 pta-BAC pta-CLO pta-STA pta-BAC pta-CLO pta-STA  
liaR liaGFSR
1
1
  
liaS liaGFSR
1
1
  
sunT yolH sunT-bdbA-yolJ-bdbB
2
0
  
liaF liaGFSR
1
1
  
liaG liaGFSR
1
1
  
sunA yolG sunA
2
0
  
liaH liaIH
0
0
  
liaI liaIH
0
0
  
atpI atp
0
0
  
atpH atp
0
0
  
atpC atp
0
0
 atpC-BAC atpC-STA atpC-STR atpG-STR  
atpB atp
0
0
 atpB-STA atpB-STR  
atpA atp
0
0
 atpA-LAB atpA-STA atpA-STR atpC-STR  
atpG atp
0
0
 atpB-STR atpG-STA atpG-STR  
atpF atp
0
0
 atpF-STA atpF-STR  
atpE atp
0
0
 atpE-BAC atpE-STA  
atpD atp
0
0
 atpA-STR atpD-BAC atpD-LAB atpD-MYC atpD-STA atpD-STR  
ureB ureABC
5
5
 ureB-STA  
yshE yshE
0
0
 yshE-BAC yshE-BAC  
hemH hemF hemEHY
0
0
 hemH-BAC-1 hemH-BAC-2 hemH-STA  
ureA ureABC
5
5
 ureA-STA  
hemN yqeR lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV
3
6
 x1621-STA  
yshB yshB
0
0
  
hemB hemAXCDBL
2
3
  
hemC hemAXCDBL
2
3
 hemC-BAC-1 hemC-BAC-2 hemC-STA  
hemA hemAXCDBL
2
3
 hemA-BAC-1 hemA-BAC-2 hemA-STA  
hemD hemAXCDBL
2
3
  
hemE hemEHY
0
0
 hemE-BAC hemE-STA  
hemZ yhaV hemZ
4
1
  
ybdK ybdK
1
2
  
yxjN yxjN
0
0
  
yxjI yxjJI
2
1
  
yxjH yxjH
0
0
  
ybdO ybdO
1
1
  
yxjJ yxjJI
2
1
  
yxjG yxjG
0
0
  
yxjA nupG yxjA
0
0
  
yjgB yjgB
1
1
  
yxjC yxjC-scoAB-yxjF
2
2
  
yxjB yxjB
0
0
  
yabE yabE
0
0
  
ybxI ybdS ybxI
0
0
  
ybxH csgA-ybxH
2
1
  
abh yzaA abh
2
2
 abrB-BAC-2 abrB-BAC-2  
ybxG ybdP ybxG
0
0
  
sul pabBAC-sul-folBK-yazB-yacF-lysS
2
2
  
sbcD yixA sbcD-yirY-yisB
1
0
 x1499-BAC x1593-STA  
splA ykxI splAB
2
2
  
gerKB gerKACB
2
1
  
splB spl splAB
2
2
  
spoIIGA spoIIGA-sigE-sigG
6
7
  
yvgO yvgO
1
0
  
ylbC ylbBC
1
1
  
ylbB ylbBC
1
1
  
ylbE ylbDE
1
1
  
ylbD ylbDE
1
1
  
ylbJ ylbJ
2
1
  
ylbO gerR gerR
1
0
  
tagD tagDEF
3
5
 tagD-STA  
tagE gtaD tagDEF
3
5
  
tagF rodC tagDEF
3
5
  
tagA tagAB
2
4
 tagA-STA  
tagB tagAB
2
4
  
tagC dinC tagC
1
2
  
valS valS-folC
2
2
 valS-BAC valS-STA  
asd spoVFAB-asd-dapG-dapA
2
3
 asd-BAC asd-STA  
yhjC yhjCB
1
2
  
nucB nucB
1
1
  
nucA comI nucA-nin
1
2
 nucA-BAC  
lrpC ydaI lrpC
2
2
 lrpD-MYC x1167-BAC lrpD-MYC x1167-BAC  
tuaH yvhH tuaABCDEFGH
2
2
  
tuaB yvhB tuaABCDEFGH
2
2
  
tuaC yvhC tuaABCDEFGH
2
2
  
fabHB yhfB fabHB
1
1
 fabHB-BAC fabHB-BAC  
malS malS
0
0
 malS-BAC malS-BAC  
malP yfiB malA-yfiA-malP
3
2
  
fabHA yjaX fabHAF
2
2
 fabH-BAC  
yfnH yfnHGFED
2
3
  
yfnG yfnHGFED
2
3
  
yfnF yfnHGFED
2
3
  
yfnE yfnHGFED
2
3
  
yfnD yfnHGFED
2
3
  
yfnC yfnC
0
0
  
yfnB yfnB
0
0
 x1714-BAC x1714-BAC  
yfnA yfnA
0
0
 lmo0645-BAC lmo0645-BAC  
malA glvA malA-yfiA-malP
3
2
 x0958-STA  
spoVID spoVID-ysxE
1
1
  
des yocE des
2
2
 x0608-BAC x0608-BAC  
ycdA ycdA
0
0
  
ycdB ycdB
0
0
  
ywkA maeA ywkAB
2
2
  
ywkC racA racA
2
0
 ywkC-BAC  
ywkB ywkAB
2
2
  
csgA csgA-ybxH
2
1
  
ywkF ywkF
0
0
  
yhdJ yhdJ
0
0
  
gcvPA gcvP gcvT-gcvPA-gcvPB
0
0
 gcvPA-BAC  
mntH ydaR mntH
1
1
 x0384-BAC x0384-BAC  
gcvPB gcvP gcvT-gcvPA-gcvPB
0
0
  
ycxA ycxA
0
0
  
ycxB ycxCB
0
0
  
ycxC ycxCB
0
0
  
mntA ytgA mntABCD
1
1
  
albC ywhQ sboAX-albABCDEFG
4
1
  
mntB ytgB mntABCD
1
1
  
albE ywhO sboAX-albABCDEFG
4
1
  
mntD ytgD mntABCD
1
1
  
albG ywhM sboAX-albABCDEFG
4
1
  
albF ywhN sboAX-albABCDEFG
4
1
  
ponA recU-ponA
0
0
  
spoIID spoIIC spoIID
3
2
  
spoIIE spoIIK spoIIE
2
5
 spoIIE-BAC spoIIE-BAC  
spoIIM spoIIM
2
1
  
spoIIP spoIIP-yqxA
2
1
  
spoIIQ ywnI spoIIQ
1
1
  
spoIIR csfX spoIIR
2
1
  
srfAA comL srfAA-srfAB-comS-srfAC-srfAD
4
5
  
ilvD ilvD
1
0
 ilvD-BAC-1 ilvD-BAC-2 ilvD-STA ilvD-BAC-1 ilvD-BAC-2 ilvD-STA  
srfAC comL srfAA-srfAB-comS-srfAC-srfAD
4
5
  
srfAB comL srfAA-srfAB-comS-srfAC-srfAD
4
5
  
ilvA ilvA-ypmP
1
0
 ilvA-BAC-1 ilvA-BAC-2  
srfAD comL srfAA-srfAB-comS-srfAC-srfAD
4
5
  
ilvC ilvBHC-leuABCD
5
5
 ilvC-BAC ilvC-STA ilvC-STR  
ilvB ilvBHC-leuABCD
5
5
 ilvB-2-BAC ilvB-BAC ilvB-STA  
ytcQ ytcQ
0
0
  
cggR yvbQ cggR-gapA-pgk-tpiA-pgm-eno
2
3
  
ytcJ ytcJ
0
0
  
ytcG ytcG
0
0
 ytcG-BAC ytcG-BAC  
ytcC ytcC
1
0
  
scoB yxjE yxjC-scoAB-yxjF
2
2
  
yhdN yhdNO
2
2
  
cymR cymR-yrvO-trmU
1
1
  
ffh ylxM-ffh
1
1
 ffh-BAC ffh-STA ffh-STR  
ysiB lcfA-ysiAB-etfBA
3
3
  
ydiO ydiOP
1
1
  
mhqA mhqA
2
2
  
rbsK rbsRKDACB
3
4
 rbsK-BAC  
ytmQ ytmQ
0
0
 ytmQ-BAC ytmQ-BAC  
rbsA rbsRKDACB
3
4
 rbsA-BAC  
pyrAB pyrRPBCAAABKDFE
3
5
  
rbsC rbsRKDACB
3
4
  
rbsB rbsRKDACB
3
4
 rbsB-BAC  
rbsD rbsRKDACB
3
4
  
moaB moaB
0
0
 moaB-STA moaB-STA  
yitB yitBA-yisZ
1
1
 cysH-BAC  
yitC yitCD
2
2
  
yitA yitBA-yisZ
1
1
  
yitF yitGF
1
1
  
pspA ydjF pspA-ydjGHI
1
1
  
ytmB ytmB
0
0
  
yitE yitE
1
0
  
rbsR rbsRKDACB
3
4
  
ytmI ytmIJKLMNO-ytnIJ-ribR-ytnLM
4
3
  
ypmP ilvA-ypmP
1
0
  
cgeE cgeBC cgeCDE
2
2
  
yvaB acpD, azoR2 yvaB
3
3
 x0677-BAC x0677-BAC  
yvaM yvaM
1
0
  
ybeC ybeC
0
0
  
dapA spoVFAB-asd-dapG-dapA
2
3
 dapA-BAC x0966-BAC  
dapG lssD spoVFAB-asd-dapG-dapA
2
3
  
ylmH ylmDEFGH
1
0
 x0322-STA  
ypqA ypqA
2
2
  
ylmD ylmDEFGH
1
0
  
ylmE ylmDEFGH
1
0
  
ylmG ylmDEFGH
1
0
 x0371-STA  
kipA ycsFGI-kipIAR-ycsK
3
0
  
yvcR yvcRS
1
0
 x0167-BAC-1  
yhcO yhcOP
2
2
  
sbp murE-mraY-murD-spoVE-murG-murB-divIB-ylxWX-sbp
3
5
 sbp-CLO  
carA cpa argCJBD-carAB-argF
3
4
  
mmr mmr
0
0
  
oppA spo0KA oppABCDF
2
1
 oppA-BAC-1 oppA-BAC-2 oppA-LAB x0571-BAC x0772-BAC x0799-BAC x1530-STA  
oppC spo0KC oppABCDF
2
1
 x0178-BAC x0494-BAC x1458-BAC  
oppB spo0KB oppABCDF
2
1
 oppB-BAC oppB-STA stu1441-STR x0140-BAC x0484-BAC x1218-BAC x1303-BAC  
oppD spo0KD oppABCDF
2
1
 appD-BAC-1 appD-STA  
oppF spo0KE oppABCDF
2
1
  
dinB dinB
1
1
 dinP-STR dinP-STR  
recN ahrC-recN
0
0
 recN-STA recN-STR  
recA recE recA
3
6
 recA-BAC recA-STA recA-STR recA-BAC recA-STA recA-STR  
recF yaaA-recF-yaaB-gyrB
1
2
 recF-BAC  
ispA ispA
4
1
  
recU jopB recU-ponA
0
0
 recU-BAC recU-STR  
yisZ yitBA-yisZ
1
1
  
yfmR yfmR
0
0
  
yfmS yfmTS
1
1
 yfmS-BAC  
yfmP yfmPO
1
1
  
yfmQ yfmQ
0
0
  
yisY yisY
1
0
  
moaA narAB moaA
0
0
 moaA-BAC moaA-STA moaA-BAC moaA-STA  
yfmJ yfmIJ
1
0
  
yfmK yfmK
0
0
  
yfmI yfmIJ
1
0
  
kipI ycsJ ycsFGI-kipIAR-ycsK
3
0
  
yfmO yfmPO
1
1
  
yfmL yfmL
0
0
  
yfmM yfmM
0
0
  
ydiP ydiOP
1
1
  
yfmC yfmCDEF
1
1
  
ydiR ydiRS-ydjA
0
0
  
ydiS ydiRS-ydjA
0
0
  
yfmF yfmCDEF
1
1
  
yfmG yfmG
0
0
  
yfmD yfmCDEF
1
1
  
yfmE yfmCDEF
1
1
  
gntK gntRKPZ
4
5
 gntK-STA  
guaD yknA guaD
2
2
 guaD-BAC guaD-BAC  
guaC yumD guaC
1
1
 x0222-BAC x0222-STA x0222-BAC x0222-STA  
guaB guaA guaB
0
0
 guaB-BAC guaB-STA guaB-STR guaA-BAC-1 guaA-BAC-2 guaA-STR yaaE-BAC guaB-BAC guaB-STA guaB-STR  
guaA guaB guaA
1
1
 guaA-BAC-1 guaA-BAC-2 guaA-STR yaaE-BAC guaB-BAC guaB-STA guaB-STR guaA-BAC-1 guaA-BAC-2 guaA-STR yaaE-BAC  
spoVFB dpaB spoVFAB-asd-dapG-dapA
2
3
  
yceC yceCDEFGH
2
2
  
gntZ gntRKPZ
4
5
  
yceG yceCDEFGH
2
2
  
yceF yceCDEFGH
2
2
 yceF-BAC  
yceE yceCDEFGH
2
2
 yceD-BAC-1 yceD-BAC-2  
yceD yceCDEFGH
2
2
 yceD-BAC-2  
yceK yceK
0
0
  
gntR gntRKPZ
4
5
 gntR-BAC x0770-BAC x1154-BAC x1448-BAC  
yceH yceCDEFGH
2
2
  
gpr gpr
4
2
 gpr-BAC gpr-BAC  
kinE ykrQ kinE-ogt
1
1
  
kinB kinB-kapB
2
2
  
kinC ssb kinC
2
2
 ssb-BAC-1 ssb-BAC-2 ssb-OYP ssb-STA ssb-STR x1145-LAB  
kinA scoB, kinA
2
2
  
spoIIIAH yqhV-spoIIIAABCDEFGH
3
4
  
parE grlB parEC
1
1
 parE-BAC-2 parE-STA parE-STR  
gntP gntRKPZ
4
5
 gntP-BAC  
parC grlA parEC
1
1
 parC-STR  
sspN sspN-tlp
2
2
  
spoIIIAA yqhV-spoIIIAABCDEFGH
3
4
  
spoIIIAB yqhV-spoIIIAABCDEFGH
3
4
  
spoIIIAC yqhV-spoIIIAABCDEFGH
3
4
 spoIIIAC-BAC  
spoIIIAD yqhV-spoIIIAABCDEFGH
3
4
 spoIIIAD-BAC  
spoIIIAE yqhV-spoIIIAABCDEFGH
3
4
  
spoIIIAF yqhV-spoIIIAABCDEFGH
3
4
  
spoIIIAG yqhV-spoIIIAABCDEFGH
3
4
  
sspO cotK sspOP
1
1
 sspO-BAC sspO-BAC  
yjmF uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
alsT alsT
1
1
 alsT-BAC-1 alsT-BAC-2 alsT-STA alsT-BAC-1 alsT-BAC-2 alsT-STA  
alsS alsSD
5
2
 ilvB-BAC  
ywfA ipa-79d ywfA
0
0
  
alsD alsSD
5
2
 alsD-BAC  
ywfI ipa-87r ywfI
0
0
 ywfI-BAC ywfI-BAC  
ywfL ipa-90d ywfL
0
0
 ywfL-BAC ywfL-BAC  
galT ipa-36d galKT
1
1
  
ysnF ysnF
1
0
  
ytbQ bioWAFDBI-ytbQ
1
1
  
galE galE
1
1
 galE-BAC galE-CLO galE-LAB galE-BAC galE-CLO galE-LAB  
galK ipa-35d galKT
1
1
 galK-STR  
gabT ycnG gabTD
3
2
 gabT-BAC  
gabR ycnF gabR
2
1
  
gabP nrg-21 gabP
3
3
  
gabD ycnH gabTD
3
2
 gabD-BAC  
yhaX yhaX
1
1
  
yhaZ yhaZ
1
1
 yhaZ-BAC yhaZ-BAC  
yhaM yhaONM
1
1
 x0174-BAC  
yhaN yhaONM
1
1
  
yhaO yhaONM
1
1
  
yqkB yqjYZ-yqkABC
0
0
  
tpx ytgI tpx
0
0
 x0599-BAC x0599-STR x0599-BAC x0599-STR  
cdd cdd-era
3
2
 cdd-BAC  
yoaA yoxCB-yoaA
1
1
  
yoaG yoaG
1
1
  
yoaF yoaF
1
1
  
yoaH yoaH
1
1
  
yoaN oxdD yoaN
2
1
  
sigL sigL
1
1
  
ysxD ysxD
0
0
  
yoaR yoaR
1
1
  
ytlD ytlABCD
1
1
  
ytlC ytlABCD
1
1
 ytlC-BAC  
ytlA ytlABCD
1
1
 x0622-BAC  
ysxC lonA-ysxC
2
2
  
ytlI ytlI
3
3
  
ctaF ctaBCDEFG
1
1
  
clpX clpX
2
1
 clpX-BAC clpX-STA clpX-STR clpX-BAC clpX-STA clpX-STR  
sspL sspL
1
1
  
ctaE ctaBCDEFG
1
1
  
sspJ sspJ
1
1
  
ctaC ctaBCDEFG
1
1
  
sspH yfjU acoR-sspH
2
2
  
sspI ysfA sspI
1
2
 sspI-BAC sspI-BAC  
sspF 0.3 kb gene sspF
1
1
 sspF-BAC sspF-BAC  
clpP yvdN clpP
3
3
 clpP-BAC-1 clpP-BAC-2 clpP-STA clpP-STR clpP-BAC-1 clpP-BAC-2 clpP-STA clpP-STR  
sspD sspD
2
1
 sspD-BAC sspD-BAC  
sspE yfhQ-fabL-sspE
5
5
  
sspB sspB
2
1
 sspA-BAC sspA-BAC  
sspC sspC
1
1
 sspA-BAC sspA-BAC  
sspA sspA
2
1
 sspA-BAC sspA-BAC  
ppaC yybQ ppaC
0
0
 x1044-BAC x1044-STA x1044-BAC x1044-STA  
clpC mecB ctsR-mcsAB-clpC-radA-yacK
3
3
 clpC-BAC clpC-STA  
clpE ykvH clpE
2
7
 clpE-STR clpE-STR  
sspP cotL sspOP
1
1
  
odhB citM odhAB
1
1
 odhB-BAC-1 odhB-BAC-2 odhB-STA citM-BAC  
gerBA gerBABC
2
1
  
plsX ylpD fapR-plsX-fabDG
2
2
 plsX-BAC  
gerBC gerBABC
2
1
  
gerBB gerBABC
2
1
  
yodD mhqD mhqED
2
2
 x0117-BAC  
sigX ypuM sigX-rsiX
3
2
  
acuC acuABC
2
2
  
acuB acuABC
2
2
  
acuA acuABC
2
2
 acuA-BAC acuA-STA  
spoIVA spoVP spoIVA
2
2
 spoIVA-BAC spoIVA-BAC  
spoIVB spoIVB
3
2
  
cotV cotVWX
3
6
  
cotW cotVWX
3
6
  
cotT cotT
2
1
  
yjcA yjcA
1
1
  
yjcN yjcN
1
0
  
cotZ cotYZ
3
3
 cotZ-BAC  
ywpE ywpE
0
0
  
cotX cotVWX
3
6
  
cotY cotYZ
3
3
  
cotF cotF
2
1
  
cotG cotG
3
2
  
bofA bofA
2
3
 bofA-BAC bofA-BAC  
cotE cotE
2
2
  
yjcP yjcPQ
2
1
  
cotC cotC
3
4
  
cotA pig cotA
3
1
  
yqdB txpA, yqcR txpA
1
1
  
cotM yneL cotM
2
3
  
cotH ywrH cotH
2
2
 cotH-BAC cotH-BAC  
natA natAB
0
0
  
uxuA yjmE uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
yqhV yqgE yqhV-spoIIIAABCDEFGH
3
4
 yqgE-BAC  
comEA comD comEABC
2
3
  
comEC comD comEABC
2
3
  
comEB comD comEABC
2
3
 comEB-BAC comEB-STA  
sipT sipT
1
1
 sipT-BAC sipT-BAC  
sipU ycsB sipU
0
0
 sipU-BAC sipU-BAC  
sipV yhjF yhjE-sipV
1
1
  
sipW yqhE yqxM-sipW-tasA
3
3
 x0624-BAC  
sipS sipS
2
4
  
comER comED comER
0
0
  
nifS nifS-yrxA
2
2
  
pdp deoR-dra-nupC-pdp
3
3
 pdp-BAC  
yxlJ yxlJ-yxzF
0
0
  
yxlC sigY-yxlCDEFG
1
1
  
yxlA yxlA
0
0
  
yxlG sigY-yxlCDEFG
1
1
  
yxlF sigY-yxlCDEFG
1
1
  
yxlE sigY-yxlCDEFG
1
1
  
yxlD sigY-yxlCDEFG
1
1
  
tgl yugV tgl
1
1
  
sppA yteI sppA-yteJ
1
1
  
yjmD uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
yfmT yfmTS
1
1
  
yjmC uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
yppF yppF
1
0
  
yppE yppDE
1
0
 x0138-BAC  
yppD yppDE
1
0
  
fur yqkL fur
2
2
 fur-BAC fur-BAC  
yllB yllB-ylxA-ftsL-pbpB
0
0
 x0175-BAC  
yllA yllA
0
0
  
yppQ yppQ
0
0
  
glgA glgBCDAP
1
1
  
glgB glgBCDAP
1
1
  
glgC glgBCDAP
1
1
  
glgD glgBCDAP
1
1
  
glgP glgBCDAP
1
1
  
motA mot motAB
1
1
  
motB mot motAB
1
1
 x0327-BAC  
hrcA yqeS lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV
3
6
 hrcA-BAC hrcA-STA hrcA-STR  
xtrA xkdBCD-xtrA
1
2
  
ydhK ydhK
1
1
  
tasA yqhF yqxM-sipW-tasA
3
3
  
sinI sinIR
4
7
  
ydhF phoB-ydhF
3
4
  
ydhD ydhD
1
0
  
yflE yflE
0
0
  
yflG yflG-yflH
1
1
 yflG-BAC  
yflA yflA
1
1
  
yflL yflL
0
0
  
yflN citM-yflN
3
4
  
yflH yflG-yflH
1
1
  
yflK yflMK
0
0
 x0887-BAC  
flgC fla-che
3
3
 flgC-BAC  
flgB fla-che
3
3
 flgB-BAC  
yuaG yuaH yuaFGI
1
1
 x0426-BAC  
yuaF yuaFGI
1
1
  
yydF yydFGHIJ
2
1
  
yydG yydFGHIJ
2
1
  
flgE flgG fla-che
3
3
 x1650-BAC  
yydJ yydFGHIJ
2
1
  
yydK yydK
0
0
  
yydH yydFGHIJ
2
1
  
yydI yydFGHIJ
2
1
  
yuaI yuaFGI
1
1
  
flgM comFABC-yvyF-flgM-yvyG-flgKL
3
4
  
flgL yviD comFABC-yvyF-flgM-yvyG-flgKL
3
4
  
ggaA ggaAB
1
1
  
ggaB ggaAB
1
1
  
yugN pgi-yugMN
0
0
  
ldh lctE ldh-lctP
5
3
 ldh-BAC ldh-STA ldh-STR ldh-STA  
yxnB yxbBA-yxnB-asnH-yxaM
1
0
  
yjzC yjzC
0
0
 x1177-BAC x1177-BAC  
yjbE yjbE
1
0
  
yjbD spx, spxA yjbCD
7
8
 x0334-BAC-2 x0510-STR  
yjbC yjbCD
7
8
  
yczG yczG
0
0
  
ywqL ywqL
0
0
  
ywqC ywqCD
1
0
  
mreC mreBCD-minCD
1
1
 x0171-STA  
ywqA ywqA
0
0
  
yczI yczI
0
0
  
ywqF ywqF
0
0
  
mreD rodB mreBCD-minCD
1
1
  
yjbV tenAI-goxB-thiSGF-yjbV
1
0
 yjbV-BAC  
ptsI ptsGHI
2
2
  
ptsH ptsGHI
2
2
 ptsH-BAC ptsH-STA ptsH-STR  
spoIIIE spoIIIE
1
1
 spoIIIE-BAC x0258-STA spoIIIE-BAC x0258-STA  
gerM gerM
2
1
  
ywgA ywgA
0
0
  
rsfA ipa-92r rsfA
3
0
  
cgeA cgeAA cgeAB
3
6
  
dppA dciAA dppABCDE
3
3
  
dppB dciAB dppABCDE
3
3
  
dppC dciAC dppABCDE
3
3
  
dppD dciAD dppABCDE
3
3
  
dppE dciAE dppABCDE
3
3
  
fhuD fhuD
1
1
  
proI yqjO proI
0
0
  
proG yzcA proG
0
0
  
yolD yolD-uvrX
1
2
  
yolC yolC
1
2
  
yolJ sunT-bdbA-yolJ-bdbB
2
0
  
thrS thrS
2
2
 thrS-BAC thrS-LAB thrS-STA thrZ-BAC thrS-BAC thrS-LAB thrS-STA thrZ-BAC  
pel pel
2
2
  
xynP xynC, ynaJ xynPB
3
3
  
yobJ yobJ
1
1
  
yobH yozLK-yobH
1
2
  
yqeU lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV
3
6
  
yqeT lepA-hemN-hrcA-grpE-dnaKJ-yqeTUV
3
6
 yqeT-BAC  
xynA xynA
1
1
  
yobW csk22 yobW
1
1
  
yqeZ yqeZ-yqfA-yqfB
1
1
  
wprA yisM wprA
1
0
  
ykzB ykzB-ykoL
3
4
  
ykzF ykuJK-ykzF-ykuL-ccpC
4
3
  
ypoP ypoP
0
0
  
pbpF ponA pbpF
1
1
 pbpF-BAC pbpF-BAC  
pbpD pbpD-yuxK
1
1
  
pbpE pbpE-racX
2
3
  
pbpB yllB-ylxA-ftsL-pbpB
0
0
 x0082-BAC  
gsiB gsiB
1
1
  
bioB bioWAFDBI-ytbQ
1
1
  
abnA abnA
2
2
  
bioA bioWAFDBI-ytbQ
1
1
 x0337-BAC  
bioF bioWAFDBI-ytbQ
1
1
 bioF-BAC  
bioD bioWAFDBI-ytbQ
1
1
  
pcrB yerE pcrBA-ligA-yerH
1
1
 x1013-BAC  
lonA lon lonA-ysxC
2
2
 lonA-BAC  
bioI bioWAFDBI-ytbQ
1
1
  
pabC pabBAC-sul-folBK-yazB-yacF-lysS
2
2
  
bioW bioWAFDBI-ytbQ
1
1
  
pabA trpX pabBAC-sul-folBK-yazB-yacF-lysS
2
2
 pabA-BAC x0931-STA  
cotSA ytbA cotSA-cotS-ytxO
1
1
  
yloB yloB
1
0
 yloB-BAC yloB-BAC  
yuiC yuiC
1
1
  
amyE amyA amyE
3
2
 amyA-STR  
infC infC-rpmI-rplT-ysdA
2
2
 infC-BAC infC-STA infC-STR  
infB ylxS-nusA-ylxRQ-infB-ylxP-rbfA
1
1
 infB-BAC infB-STR  
sda sda
3
3
 sda-BAC sda-BAC  
ycnL ycnL
0
0
  
exuT yjmG uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
ywmD ywmD
0
0
  
exuR yjmH uxaC-yjmBCD-uxuA-yjmF-exuTR-uxaBA
4
4
  
phoP phoPR
6
11
 phoP-BAC phoP-STA x1129-BAC  
pheB pheBA
0
0
  
yfkA yfkABC
0
0
  
yfkC yfkABC
0
0
  
yfkD yfkED
1
0
  
yfkE yfkED
1
0
 x1655-BAC  
yfkF yfkF
0
0
  
yfkH yfkJIH
2
2
  
yfkI yfkJIH
2
2
  
yfkJ yfkJIH
2
2
 yfkJ-BAC  
ycgT ycgT
1
1
 x0466-BAC x0466-BAC  
yfkN yfkN
1
1
  
yfkO yfkO
0
0
  
ycgI ycgI
0
0
  
nap nap
0
0
  
ycgM ycgMN
1
0
  
ycgN ycgMN
1
0
 x0155-BAC-2  
ycgA ycgA
0
0
  
ycgB ycgB
0
0
  
yufM malR yufM
0
0
  
ycgG ycgFG
2
1
  
ycgF ycgFG
2
1
  
pyrR pyrRPBCAAABKDFE
3
5
 pyrR-BAC pyrR-LAB pyrR-STA pyrR-STR  
pyrP pyrRPBCAAABKDFE
3
5
 pyrP-BAC pyrP-STA  
nasB nasBA nasBCDEF
7
7
  
nasC nasBB nasBCDEF
7
7
  
nasA nasA
3
3
  
pyrK ylxD pyrRPBCAAABKDFE
3
5
 pyrK-STR  
feuA feuABC-ybbA
3
4
  
feuB feuABC-ybbA
3
4
  
feuC feuABC-ybbA
3
4
  
pyrG ctrA pyrG
1
1
 pyrG-BAC pyrG-LAB pyrG-STA pyrG-STR pyrG-BAC pyrG-BAC pyrG-LAB pyrG-STA pyrG-STR  
pyrF pyrRPBCAAABKDFE
3
5
 pyrF-STA pyrF-STR  
pyrE pyrX pyrRPBCAAABKDFE
3
5
  
tetB tetA(L) tetLB
1
1
  
pyrC pyrRPBCAAABKDFE
3
5
 pyrC-STR  
pyrB pyrRPBCAAABKDFE
3
5
 pyrB-BAC pyrB-STA  
spo0A sof-1 spo0A
3
6
 spo0A-BAC spo0A-BAC  
glpT ybeE glpTQ
3
4
 glpT-BAC  
spo0B spo0D spo0B-obg
1
1
  
glpQ ybeD glpTQ
3
4
 x0792-BAC  
glpP yhxA-glpP
0
0
 glpP-BAC glpP-STA x0199-BAC  
spo0F spo0F
3
4
 spo0F-BAC spo0F-BAC  
spo0M ygaI spo0M
1
1
  
glpD glpD
2
2
 glpD-BAC glpD-STA glpK-STA glpD-BAC glpD-STA glpK-STA  
glpF glpFK
3
3
 glpF-BAC  
glpK glpFK
3
3
 glpK-BAC glpK-MYC glpK-STA  
murE murE-mraY-murD-spoVE-murG-murB-divIB-ylxWX-sbp
3
5
 murE-BAC murE-STA murE-STR  
yciC yciABC
2
4
 x0659-BAC  
yciB yciABC
2
4
  
yciA yciABC
2
4
  
senS senS
2
0
  
katX yxlI katX
3
2
 katX-BAC x1042-BAC katX-BAC x1042-BAC  
codV codV-clpQY-codY
1
1
 codV-BAC  
katA kat-19 katA
1
1
 katA-STA katX-BAC katA-STA katX-BAC  
katE katB katE-yxiS
1
2
 x0451-BAC katB-BAC x0451-BAC  
codY codV-clpQY-codY
1
1
 codY-BAC codY-STA x0200-STR  
csbA csbA
2
2
  
csbB yfhN csbB
2
2
  
csbC yxcC csbC
1
1
  
csbD ywmG ywmF-csbD
1
1
 csbD-STA  
racX pbpE-racX
2
3
  
ywjG ywjG
0
0
  
csbX csbX-bofC
4
3
  
yhcZ yhcYZ-yhdA
2
2
 yhcZ-BAC  
yhcY yhcYZ-yhdA
2
2
 x0361-BAC  
ysxE spoVID-ysxE
1
1
  
ywjB ywjB
0
0
  
yhcQ yhcQ
1
1
  
yhcV yhcV
1
1
  
yhcH yhbIJ-yhcABCDEFGHI
1
0
  
yhcI yhbIJ-yhcABCDEFGHI
1
0
  
yhcN yhcN
2
2
  
csfB yaaM csfB
1
0
  
yhcM yhcM
1
0
  
yhcB yhbIJ-yhcABCDEFGHI
1
0
  
yhcC yhbIJ-yhcABCDEFGHI
1
0
  
yhcA yhbIJ-yhcABCDEFGHI
1
0
  
yhcF yhbIJ-yhcABCDEFGHI
1
0
  
yhcG yhbIJ-yhcABCDEFGHI
1
0
  
yhcD yhbIJ-yhcABCDEFGHI
1
0
  
yhcE yhbIJ-yhcABCDEFGHI
1
0
  
yocH yocH
4
2
  
yocK yocK
1
1
  
nhaX yheK nhaX
1
0
  
sapB sapB
0
0
 sapB-BAC sapB-BAC  
ytnM ytmIJKLMNO-ytnIJ-ribR-ytnLM
4
3
  
ytnL hipO ytmIJKLMNO-ytnIJ-ribR-ytnLM
4
3
  
ytnI ytmIJKLMNO-ytnIJ-ribR-ytnLM
4
3
  
ytnJ ytmIJKLMNO-ytnIJ-ribR-ytnLM
4
3
  
yisB sbcD-yirY-yisB
1
0
  
ytnA asnB-ytnA
0
0
  
nfrA ipa-43d nfrA-ywcH
3
2
  
folD yqiA nusB-folD
1
1
 folD-BAC folD-STA folD-STR  
folC valS-folC
2
2
 folC-STA  
folB yacE pabBAC-sul-folBK-yazB-yacF-lysS
2
2
  
folK pabBAC-sul-folBK-yazB-yacF-lysS
2
2
  
clpY codX codV-clpQY-codY
1
1
 clpY-BAC clpY-STA  
ctaG ctaBCDEFG
1
1
  
dhbF dhbACEBF
2
2
  
dhbE entE dhbACEBF
2
2
 dhbE-BAC dhbE-BAC  
dhbB dhbACEBF
2
2
 dhbB-BAC  
dhbC dhbACEBF
2
2
 dhbC-BAC  
dhbA entA dhbACEBF
2
2
  
rpoB rpoB
1
1
 rpoB-BAC rpoB-LAB rpoB-MYC rpoB-STA rpoB-STR rpoB-BAC rpoB-LAB rpoB-MYC rpoB-STA rpoB-STR  
sspM sspM
1
1
  
rpoE ywjF-acdA-rpoE
2
3
 rpoE-LAB rpoE-STA rpoE-STR  
ctaB ctaBCDEFG
1
1
 ctaB-BAC ctaB-STA  
ywjA ywjA
1
1
  
sspK sspK
1
1
  
bsrB BS203 RNA bsrB small cytoplasmic RNA
1
1
  
yuzA yuzA
1
1
 yuzA-BAC yuzA-BAC  
yuzC yuzC
1
1
  
ctaA ctaA
3
4
 ctaA-BAC ctaA-STA ctaA-BAC ctaA-STA  
sinR flaD sinIR
4
7
 sinR-BAC  
clpQ codW codV-clpQY-codY
1
1
 hslV-BAC  
ywrD ywrD
1
1
  
ywrE ywrE
1
1
 ywrE-BAC ywrE-BAC  
sspG sspG-yurS
2
3
  
ywrO ywrO
0
0
  
ywrJ ywrJ
1
0
  
yxnA yxnA
0
0
  
rpsF yyaF-rpsF-ssb-rpsR
1
2
 rpsF-STA rpsF-STR  
rpsD rpsD
1
1
 rpsD-BAC rpsD-CLO rpsD-STA rpsD-BAC rpsD-CLO rpsD-STA  
gerD gerD
2
1
 gerD-BAC gerD-BAC  
gerE gerE
2
1
 gerE-BAC gerE-BAC  
deoR yxxC deoR-dra-nupC-pdp
3
3
 x0511-BAC  
spsK ipa-73d sps
1
1
  
apt yrvE-apt
0
0
 apt-STA apt-STR  
ykyB ykyB
0
0
  
rpsR yyaF-rpsF-ssb-rpsR
1
2
 rpsR-BAC rpsR-LAB rpsR-STA rpsR-STR  
rpsP rpsP-ylqC
0
0
 rpsP-BAC rpsP-LAB rpsP-STR  
usd usd-spoIIID-mbl-flhOP
1
1
  
comGC comGABCDEFG-yqzE
3
3
 comGC-STA  
comGB comGABCDEFG-yqzE
3
3
  
comGA comGABCDEFG-yqzE
3
3
 comYA-STR  
comGG comGABCDEFG-yqzE
3
3
  
comGF comGABCDEFG-yqzE
3
3
  
comGE comGABCDEFG-yqzE
3
3
  
comGD comGABCDEFG-yqzE
3
3
  
ynzD ynzD
0
0
  
cotB cotB
2
3
  
phoR phoPR
6
11
  
yfhH yfhGH
0
0
  
thiS yjbS tenAI-goxB-thiSGF-yjbV
1
0
 x0478-BAC  
yabR yabMNOPQ-divIC-yabR
4
3
 yabR-BAC  
phoA phoAIV phoA
3
2
  
phoB phoAIII phoB-ydhF
3
4
 phoB-STA x1451-BAC  
phoD ycbS phoD
2
2
  
thiM ywbJ ywbI-thiME
1
1
  
thiG yjbT tenAI-goxB-thiSGF-yjbV
1
0
  
thiF yjbU tenAI-goxB-thiSGF-yjbV
1
0
  
thiE ywbK ywbI-thiME
1
1
  
thiD ipa-52r thiD
0
0
 thiD-BAC yjbV-BAC thiD-BAC yjbV-BAC  
ytxK ythI ytxK
0
0
  
ytxJ csb40 ytxGHJ
2
2
  
ytxH csb40 ytxGHJ
2
2
  
ytxO ytbB cotSA-cotS-ytxO
1
1
  
ytxM ytfB menBEC
1
3
  
ytxC ytxC
1
1
  
odhA citK odhAB
1
1
 odhA-BAC  
yslB yslB
0
0
  
ytxG csb40 ytxGHJ
2
2
  
purA purA
2
2
 purA-BAC purA-STA purA-STR purA-BAC purA-STA purA-STR  
ytxE motS ccpA-motPS
0
0
  
ytxD motP ccpA-motPS
0
0
  
yfhB yfhB
0
0
  
narI narGHJI
2
2
 narI-BAC  
narH narGHJI
2
2
  
narK narK-fnr
4
4
 narK-BAC  
narJ narGHJI
2
2
 narJ-BAC  
narG narGHJI
2
2
 narG-BAC  
ylaC ylaABCD
3
2
  
rodA ipa-42d rodA
0
0
  
rapK yobG rapK-phrK
1
1
  
rapJ ycdE rapJ
0
0
  
rapI yddL rapI-phrI
2
2
  
rapH yzqA rapH-phrH
3
4
  
rapC yclL rapC-phrC
4
3
  
rapB ywmE rapB
1
1
  
lpdV bkd ptb-bcd-buk-lpdV-bkdAABB
4
4
  
rapG yycM rapG-phrG
3
3
  
rapF ywhJ rapF-phrF
2
1
  
rapE yqcH rapE-phrE
3
3
  
rapD ywpA rapD
3
2
  
pycA ylaP ftsW-pycA
1
0
 x0181-BAC x0181-STA  
yabJ purR-yabJ
1
1
 x0018-BAC  
gmuB gmuBACDREFG
3
1
  
yrbD yrbD
0
0
  
ruvA ruvAB
1
1
 ruvA-STA  
ruvB ruvAB
1
1
  
mutL mutSL
0
0
 mutL-STA  
mutS mutSL
0
0
 mutS-STA  
yfhI yfhI
0
0
  
ydjP yeaA-ydjP-ydjO
1
1
  
ylxA yllC yllB-ylxA-ftsL-pbpB
0
0
  
ylxG fla-che
3
3
  
ylxF fla-che
3
3
  
ylxH fla-che
3
3
  
ylxM ylxM-ffh
1
1
 ylxM-BAC ylxM-STR  
ylxL fla-che
3
3
  
ydjA ydiRS-ydjA
0
0
  
ylxR ymxB ylxS-nusA-ylxRQ-infB-ylxP-rbfA
1
1
 ylxR-BAC ylxR-STR  
ydjC ydjC
0
0
  
ylxP ymxD ylxS-nusA-ylxRQ-infB-ylxP-rbfA
1
1
  
ylxW murE-mraY-murD-spoVE-murG-murB-divIB-ylxWX-sbp
3
5
  
ydjG pspA-ydjGHI
1
1
  
ydjI pspA-ydjGHI
1
1
  
ydjH pspA-ydjGHI
1
1
  
ylxX murE-mraY-murD-spoVE-murG-murB-divIB-ylxWX-sbp
3
5
  
ydjM yzvA ydjM
0
0
  
rapA spo0L rapA-phrA
3
2
  
ydjO yeaA-ydjP-ydjO
1
1
 x1004-BAC  
cotS cotSA-cotS-ytxO
1
1
  
divIC yabMNOPQ-divIC-yabR
4
3
  
divIB tms-12 murE-mraY-murD-spoVE-murG-murB-divIB