Similar regions between promoters of narK
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TATGATCTGGCTTCTGCTCTGCACAGCTTCTACAACGCAGAGAAAGTCATCGACCCTGAA hal .........................GCTTCTCTAACGCAAATA................. -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AATGAAGAGAAAAGCCGCGCGCGCCTGGCTTTAATGAAGGCAACGCAAATTACGCTGAAC hal .........................................AACGCAAATAGCTCT.... -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ]]] sub AATGCGCTTCAGCTGATCGGCGTATCGGCTCCGGAAAAAATGTAATCACGATCAAAAGGA hal .......TTTAGGTGATCGGCAT..............................AAACGTT -180 -170 -160 -150 -140 -130 @@@@@@@@@@@@@@@@ ]]]]]]]]]]]]]]]] ]]]]] sub CAAAGTCTTCGGGCTT-TGTCCTTTTTTTATGAGAAAAACGTGTGATGTAATTCACAATC hal TAATGGCTTCGAGCATGTTTCGTTTTTCTTTCTGTGTAACCTGTGGCATAA---GCTCCC -120 -110 -100 -90 -80 -70 sub CTGTTTGGCTAGTTTTTGTATGATAAGACTGATTATTGAATCATTGAAAGGGGCAAGCCA hal CTTTTTCACTTCTTTTAG.......................................... -60 -50 -40 -30 -20 -10 sub A hal . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...