Similar regions between promoters of spoIVCB
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ATATAACACTTTGTCATACGAAGATGCGCCTTGGATCTGTTGCGGAACCATTAAACAAAG ste ..........................................................AG -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAGAACTGCTGCAGCAAGAAACAGGCCTGCCATCCATTTTTTCATCCCCATCCCCCCATA ste GCGGACCGCATCAGCA-GAACGTTGGCATCAATCGTTTTT.................... -240 -230 -220 -210 -200 -190 sub CCTTTGTTCATTTCAATGTATGGGCGCTTGATGAAGAATATTTTTAACATTTGAAGTTAG ste ...TTGGTCAGGTCATTG.....GCGCTTGTTG........................... -180 -170 -160 -150 -140 -130 @@@@@@@@@@@@@@@ sub TATGCTGCTTACCAAAGCCGGACTCCCCCGCGAGAAATTTCCCGGTACAGACACAGACAG ste ........TAACGATAGGCGGTTTCCGCCG..............GTAAAGACACGGACAA -120 -110 -100 -90 -80 -70 @@@@@@ @@@@@@@@@@@@@@@@@@@@ sub CCTCCCGGTCACATACATTTACATATAGGCTTTTGCCTACATACTTTTGTGGAGGTGACG ste CATCGCCCCTGCATATACATAACGATAGGCGGTTTCC....TATTTTTGTCG........ -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...