Similar regions between promoters of thiA
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AATATTATCTATATTCCTCTTTTTTTCAGATTGATTTTATGATAAGATGAGTGCGAAATC hal .............TTCCCTTTTCGCTCAGTTT--CTTTATAATGAAACTCGAACTTAAT- -300 -290 -280 -270 -260 -250 sub AATAGTTACTGGGGGTGCCCGCTTTC--GGGCTGAGAGAGAAG-GC----AAGCTTCTTA hal AGAAATAACTAGGGGAGTCCAATGAGCTGGGCTGAGAAAAAAACGCGATGAAGTTTTTAA -240 -230 -220 -210 -200 -190 sub ACCCTTTGGACCTGATCTGGTTCGTACCAGCGTGGGGAAGTAGAGGAATTGTTTTTGTTA hal ACCCTCGGGACCTGATCTGGATCATACCAGCGTGGGGAAGT................... -180 -170 -160 -150 -140 -130 ]]]]]]]]]]]]]]]]]]]] sub TTGTCTTGCTGGGCAATAATATGTTTCTTTCTGACTGTAACCGGGTTCATTTATATGAAT hal ......................GTTTCTTTAT-AATGAAAC.........TTTTATGGAT -120 -110 -100 -90 -80 -70 ]]]] sub CCGGTTTTTTGTGCTGGTTATGGGCTTGATTTTGTCCTTTCAAACGTAGAAAGGGGAAGG hal TCAGAATCTTGTCCTG............ATCTTGTCCTGACGA--CTACACACGCGAAGG -60 -50 -40 -30 -20 -10 sub AAAAGTA hal AGA.... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...