Similar regions between promoters of xylA

sub TCTTTTAATAATAACTTTTGATTTACTTTTTTGACAAAGGTTTGATCAGC-GATATCCAC hal ...TGTAAAACAATTTGCTTATTCATTTGTTTAATGAAACGTTGATCACCAGTTACCGAC -300 -290 -280 -270 -260 -250 sub TTCATCCACTCCA-TTTGTTTAATCTTTAAATTAAGTATCAACATAGTACATAGCGAATC hal ATACATCACACCACTTTGATTAATATT................................. -240 -230 -220 -210 -200 -190 sub TTCCCTTTATTAAATCTAATGTGTTCATAAAAAACTAAAAAAAA-TATTGAAAATACTGA hal .....TTTCTTAGA-CTAATGGATAAAATAAAAACTTAGTTTGTCTATTGAATAAACTAA -180 -170 -160 -150 -140 -130 @@@@@@@@@@@@@@@@@@@@@@@@@ sub CGAGGTTATATAAGATGAAAATAAGTTAGTTTGTTTAAACAACAAACTAA---TAGGTGA hal .................ATAAAAACTTAGTTTGTCTATTGAATAAACTAAGTATAAGTGA -120 -110 -100 -90 -80 -70 sub TGTACTTACTATATGAAATAAAATGCATCTGTATTTGAATGAATTTATTTTTAAGGGGGA hal TATACT...................................................... -60 -50 -40 -30 -20 -10 sub AATCAC hal ...... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...