Similar regions between promoters of ycgR
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GACCTGCAAGCCATCATATGTCCCGTGCTGATTATGCAAAGTGTTTATGACGGATTGGTT hal .........................................TTTTTATGATAGAATGAT. -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GACTTGTCACATGCACATCATGCAAAAGAGCACATTCGTGGCGCTGTTCTCTGTTTGCTT hal .........................................CTCTCCTTTCTGTTTGCTC -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CACTCATGGGGACACCTGATTTGGCTCGGAAAAGAAGCTGCAGAAACAGGCAGTATCCTA hal CTCT.................................CTTCCTAAAAAGCCAGAAAACAA -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>> sub CTCGGCTTTTTGGAATCCTAACCAAAGTGAAACGATCCTTTCCCCTCCTCCGTCAAACAA hal ATAGAC----TGGAATCATAGC...AGTAAAACCGTCGTTTTCCCACTTCCTAAAAA... -120 -110 -100 -90 -80 -70 sub GCAGTGCCTTTTTTTCTGGTATCATAAGAAAG-GCAGCTTAACATGAGCGGAGGTTTTAT hal .......CCTTTTTTATGATAGAATGATAAAGCGAATATTTTCATAAG............ -60 -50 -40 -30 -20 -10 sub T hal . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...