Similar regions between promoters of ydfB

sub GAAATTTGATGATCCGGCAAAAGCACACGGAACAGAAGAAGTGTTTCCAAAGGGTCCGTG hal ............................................................ -300 -290 -280 -270 -260 -250 sub ATGAAATTGGTGACCGTTTAAAACAGTTTGCTGTAACTGGGGAATAAAGAATCGATATAT hal ..................................AACCTAGTAATGTAACATTGATATAT -240 -230 -220 -210 -200 -190 ]]]]]]]]]]]]]]]]]]] sub TCAGCGTTTTCTTGGGTTATATAATACAATGTGTTGTTCAACAGGTGTCTGCGAGCTGAG hal TC.....TTTCTTGGGTAATATAAGACATCATGTAG........................ -180 -170 -160 -150 -140 -130 ]]]]]]]]]]]] sub TGCAGACACCTGTTTTTGTTTTTATTTGTCTGAGATTCGTAACAGGGAAGTTATTTAGCT hal ............................................................ -120 -110 -100 -90 -80 -70 sub GGTGACAGAGGAAAATTGATTTGTGAACAGAATCATG--AAGGAGACGGTGTTTTAAAGG hal .........GTAACATTGATATATTCTTTGAATCCAGTAAAGTTGAGTGTGTTATAAAGA -60 -50 -40 -30 -20 -10 sub AG hal A. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...