Similar regions between promoters of yitT
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CATTTTGCATCGCTTCAAATATTTGATCCGCATGAATTGTGACTGCATCTTCGAATTCTT hal ...........GCTTTAAACAATCG-TCCGCTTTATTTGTGGC................. -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TATCGCCGAGAGAAACCCTGAGCGGAATAAAGCCAATGCCTTTTTCTTCAAAATAAGAAC hal ........AAAGAAACTATGAGC.................................GAAA -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GAGGCAAATCAGTGGCGCTGTCAGCGATGAGATGAACTGTCATATTGCTTCCCTTCTTTC hal GAGGTTGATCT-TGGCGAGGAGATTGATGCTTTAAACAATCGT................. -180 -170 -160 -150 -140 -130 sub CGTTATCGCTCGTTATCATGAGAGTTAAGCCAACTATATCATATTAATTTGCCAAAATCG hal ......CCCTCGTTAAATTGAAAG.................................TCT -120 -110 -100 -90 -80 -70 sub TGTTCAAATATTTGTTTTAAGGGAAAACATAATAAAGAAGAAAGAGCGGAGGAACATGCC hal TGAGGAAAGAGGGGTTACACTGGCGAATGAAATAAAGGA..................... -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...