Similar regions between promoters of yobL

>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AGAATGCCATTTAATGATCGATAAAGATAAAGTGAACCAAGGTGATCCCAACTATCTCTA ste .GATTGCCAATCAGGGATGG--AAAGATTCAG.........................CGA -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TATATTTGAAAGTGGTTTAGAATATAATCCATTAAATTTAAACTTTGAAAAATTTTTAGA ste TTTATTTG...................TCCATTGGATTGA................TTGA -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CCGGTATATATTGGCCAATGGGGAACCTTTTTGGGATTGGCGCTACTATACCGCAGAAAA ste CCGGTAT...............................GGCGATTCGATTGTGCACGAAA -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>> ]]]]]]]]]]]]]]]]]]] sub TTATTATAGAACAAGATAGTGTGTGATGTATAAGACAGTCATTTTGGCTGTCTTTTTCTG ste ...............................................CTTTTTAGTTCTG -120 -110 -100 -90 -80 -70 sub TTATTCAATTAGATTACTGTGGTAAAATTTACATAGAAGTAGTCTAGGAAGGAGAATGAT ste TT...................................AGGAATCGAGCAAGGGGATTG.. -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...