Similar regions between promoters of ywoB

<<<<<<<< <<<<<<<<<<< sub CTGTATCG-CCCATTTGCATGTCTCATTCCTCCGTATCTTTCAGAATAAAAAGCAATTAT hal .TGTATGGTCCCATTTGAAAATTCCACTCCT............................. -300 -290 -280 -270 -260 -250 sub TATATTTCTTCATTATAGAGAAAAAAGAATGATAAAACATTTTCATGTAAGATTTCCTGA hal ..............................................GTACGATTTCCATA -240 -230 -220 -210 -200 -190 sub CATGGTTT-TTGAGAAATGTTATCGAGGGATGGAAAGGAAGGAGAATGGCATTTTTTGCG hal GATTGCATGTTTATAAGTGT........................................ -180 -170 -160 -150 -140 -130 sub ATATAAGACTTTGTATCTATAAAAGAAACTATTCATATGAGCTGAAAAGGGAATTGACAT hal ....AAGACTTTGTTTC.........................TTATAACGAAATATACTA -120 -110 -100 -90 -80 -70 sub TAATTAGAATACTCTATACTGTATTAAGTGTACTACATCAAATAATACACTGAGGGGGAT hal AAATTAAAA................................................... -60 -50 -40 -30 -20 -10 sub GT hal .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...