Similar regions between promoters of argC
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CTTTCTCGCTGACTTTTTCACAGTGCAAATGATTTTTTATGCAAGCTCTATTCTATATTT hal ...................ACAGTTGAATTTATTTTT....................... ste ........................GAAAATTATTAAATATACAT--TTGATTTTATTTTT -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>]]]]]]]]]]]]]]]]]]]]] sub TTTGAGTGGATTGATGATGATGAAAACAGGCTGACGCGGTCAGCCTGTTTTTTTATGCGG hal ............................................................ ste ATACAGTATTATAATGAGAACTACATGAGGCATACGGG...................... -240 -230 -220 -210 -200 -190 ]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] sub CTGAAATGCGGCACCGCATCAACGTTTTTGTGCTGGAGTCGTGCTGATTTTTTTTGAGCG hal ....................................................TTTTCGCC ste ............................................................ -180 -170 -160 -150 -140 -130 @@@@@@@@@@@@@@@ @@@ @@@ sub GAATTCCCATTGAACAGAAAATTTATAAATGAATAAAAATAT-TAAATATACGATTGAAT hal GATTAGAAAATAAAACAAAAATATATAAA..AACAAAAATATATAAAAATACAGTTGAAT ste ................GAAAATTATTAAAT....AAAATTAT-TAAATATACATTTGATT -120 -110 -100 -90 -80 -70 @@@@@@@@@@@@@ @@ sub TAATTTTTATTCA-TGTTATAATGTTAAATAATTTCACAAAGACCAAGAGGGTGAACTTG hal TTATTTTTATTCAGTTTTATAATCAGAAGCAACGTTAAAAA................... ste TTATTTTTATACAGTATTATAATGAGAACTACATGAGGCATACGGGTGAGGGGGAACATG -60 -50 -40 -30 -20 -10 sub TT hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...