Similar regions between promoters of gtaB
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TCTTGATCGCTTCAGGCCTGGTCCCGAAAACGGTCATCACTTTTAGTTTTTTCATATTTG hal ............................................................ ste ............................AACGTTCATTGCGTCGTTTCGTTTCTTTTCCG -300 -290 -280 -270 -260 -250 sub T-CACCTGGTTTTCTGCTATAGTAAATAAATTCATACTACATATTCTACATGAAAATGCA hal ....................................................AAGATGCA ste TTCAACAGGATT--TGGTATAATAAAAACA.............................. -240 -230 -220 -210 -200 -190 sub TCATTTTAAATCATTTCATTCTTGATTCAAATAAAATGATATAAGTTTTAATATTAAGGA hal TTA......................TGCAAAGAAAGAGAAAGATGCATTA.......... ste ..........TCGTTTCTTTTCCGTTCAACAGGATTTGGTATAA................ -180 -170 -160 -150 -140 -130 sub TAAAGCTTGTTTAAAAATGGTTTATCCGATATCATAAAAATGTGTAAAAACATATTGAAA hal .AAAACTATTTGAAGAATTGCTT......................AAAAACTATTTGAAG ste .......................ATTTGGTATAATAAAAA.GTGTAAGAAC......... -120 -110 -100 -90 -80 -70 sub AGGGTAAATAGAGAATAGTTTAACCATAAATTTTTTCGATCATAAGGAAGGTGCCTTTTA hal A...............AGTCTATCCGAAGATTT...........AGAAAGATGCATT... ste ...............................TTTTCCGTTCAACAGGA............ -60 -50 -40 -30 -20 -10 sub A hal . ste . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...