Similar regions between promoters of ilvA

<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GATGTTCTCCGATTAGATGTTGAAATGTATTGAGTTTTGGTGCACTATTCATCAATTGGC hal ..........GTTAAGATGATGATAT.................................. ste ............................................................ -300 -290 -280 -270 -260 -250 sub TCCTTTTGGTTCTAATTGGTTTCATTATATCATGCCTTTTGGTTGAAAACACCCTTTATT hal .............................................ATAACAGTCCGTATG ste ..........................................................TT -240 -230 -220 -210 -200 -190 sub TTACGATCATCTTTTTTCTTGGCTCTGCAGGATAATGGTTGAACAGAAGTTACCACAAGA hal TTAAGATGATGATATT............................................ ste TTGCGATGGTTTTTGT............................................ -180 -170 -160 -150 -140 -130 sub TGTGGTGGACATAGTCTGTATTTTTTTAATTATTAAATAAAAATAATTGTCTTATTTTTT hal .....TGTACGTATCGTCTCTATTATAATTTTCTAACTCGCAATAATCAACTCCATTCAG ste ..........................TAAATAATCAATAAAAAAA............... -120 -110 -100 -90 -80 -70 sub GAATATTCATGTTATAATGGCATATTAAATAGGGATTTAAAACAAGAAAGGAATCTGTAC hal TTACAAGCTTGTGAAAACGCTTTTTCAAAT.............................. ste .......................ATTGTACACAGCTTCTCAACTGGAAAAGAATCGGT.. -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...