Similar regions between promoters of mobA
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AGTTTTTCTTTCATATCGGTATTTTCTTTGAGCAGTTTGTTATTTTTCTGATGAAAGTAG hal ..TTTTTGTGTTCTCTCGTTTATTTC.................................. ste ..........................TTTCGGCTGTTTGACAGTTT.............. -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CTTGCTTCAAGTTCAGAAATCAGCTTATGGCACCTTGAAAGCTCGGATTTTAAATAAAGG hal ........................TTATGTCATAATGAAAAAAAGGTTTCTA........ ste .......................CGTATGGTACGGTAAAAAC.......TGAAACAAACG -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TTCTCCTGAGACACGTCGTGGAAAAAAGGACCTGATCTTTTCATTCGAACCATCTCCCTC hal ..................TGAAAAAAAGG....................CTAGCTTCTTC ste ATTGCCGGAG........................ATCTTTTTTTTCG...........TC -180 -170 -160 -150 -140 -130 sub ATGATGTTAACACTACAATATGCAAATACTGAACAGCTATTCCTCTTTAATAAACAGACA hal ATGACGTTGAAAC............................................... ste ATGATG..................................TCCGCTGCAATACCAATTCA -120 -110 -100 -90 -80 -70 sub AGCAGTAGCGTTGAGCCTTTGCTTTTGCTATGCTTTTAACGAAACTAGAGGTGAGATGAT hal ..CCGTAACGCTAATCTTTTTCGAAGCTTATCCAATTCACGA.................. ste TGATGGAGCGT................................................. -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...