Similar regions between promoters of tnrA
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<<<<<<<<<<< sub AAGCCTGTTCTCCGGCAAGCTGCATAAACGTCTCCAGCATT--TCATCACGCTTGATATC hal ........................TAAACTTTTCCTTGTTTGTTCATCGCGATT--TCTC ste ............................................................ -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CAACTCTATAATTTCTTTTGCCAGTGAGACTGCTTTTTCTTCCTCCATGATTATCCTTCC hal CCACCCATCAAAGTTATTTCCGAGT................................... ste ....TGTAAAATTGCTTTTTC..GTAAAATTGCTTTTTCTTCC................. -240 -230 -220 -210 -200 -190 sub TCCTCGTTTGATTCGTTACATAAAGGATAAAACGCGCTTGGGTGTTACGCATTATTCTTG hal ............................................................ ste ............................................................ -180 -170 -160 -150 -140 -130 sub TTAATTTTTCTTCCGTATTTTTTCAAAAATCTTCTATTTGATGTTAGAAAATATGACAAG hal ...AGTTTTTATATCTGTTTTATAAACAATATCCTAT....................... ste .TCATTTTTTGTATAATTACGTTAGAAAATATAACGTTAGAGGTGAGAAA-TATGACA.. -120 -110 -100 -90 -80 -70 sub CGTCAGGTTTTTTCTCTTTGTTTTTTATATACTAT--TATCAAAAGACATCCAGGGGTGG hal ..TCCGAGTTTTTATATCTGTTTTATAAACAATATCCTATCATAAAA............. ste ............................................................ -60 -50 -40 -30 -20 -10 sub AAAA hal .... ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...