Similar regions between promoters of ydiG

<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CGCCCTTTTCATACGAAAGCTGGCCTGCGATAATTTTAAGGAGCGTGGATTTTCCGGCGC hal ...CTTTTTCACTTGAAAAC........GTTAAAATCATACAGCGTACAGTTTTCGGCGC ste .GCCGCTGTCGAAAGAGAGTTCACCGGCGATGATTTTCAACAATGTCGATTTTCCCGCTC -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CATTTCTTCCTACAATGGCGATGCGATCACGATTTCTGACTTCCAGCTTTATATTGTTTA hal ..........................TCTCCTTTATTGACAAACTGTTTTCTGTTTACTA ste CGTTGCGGCCGACAAGGGCAATTCGGTCGCGGGACTGTATTTCTAGTTTTATATTCGATA -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAATAGTATCAGCACCAAATGATTTGGACAGCTGATTAGCTTGTAAGATCATCATATTAT hal TGATAGCA............................................CATTTCGT ste AAATAAGGTCAGCGCCGAAATATTTCGTGAGCCCGTGCACTTGCAAAATGATCATGTCCG -180 -170 -160 -150 -140 -130 sub TTCACCTCTGCTATAAT--AAGTTAAGTGTAGCTTATGAACCAGAAGTCAGCAAACAATA hal TCATCCTCTCCTTTATT--GA....................................... ste T-CACCTCGCGAATAGTTTAACGTAAGT................................ -120 -110 -100 -90 -80 -70 sub CATTGGCCATATAAGACATAGAGAAGAAAATAGTGTATGATCTGTTTAAGGAGCGTTTTA hal ...............ACATAAAGAGTAAAATCGTATCTGAAATGGTTAA........... ste ..........................AAAATCGTGTATAGTGTATAAATGGAG....... -60 -50 -40 -30 -20 -10 sub AT hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...