Similar regions between promoters of yfhF
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GATAAAAAGTCAAGCGCACGGTTGAAGCCTTTCTTCACTTCATCGCCGTATTGAATCTCA hal .............................TTTCATTGTTTGTACTCCTTTATAAATGAAA ste ........................ACGCCTTT-TTCACCTCATCGGCATACACAATAT.. -300 -290 -280 -270 -260 -250 <<<<<< <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ATGATG-TCAAGATCATCGAGTTCTTTTCCCTTCTTGAGCTCAAATTTCACGAGCACATC hal ATGATTATCAATATCGT........................................... ste ............................................................ -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CGCGTCCACGCTGAAGGCGTATTTATCATCCAGAAAAATATTGAAGCGTTCCGTATTCTT hal .................................................TTCGTCAGCTT ste ............................TGCACGACAATCCAAAATCGTTCAGCATTTTG -180 -170 -160 -150 -140 -130 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TTTTTGCGTTGATATTTTTGTAATAAACGGCATCTTAATCTCCCTTCTCAGGCCTGAAAC hal GTTCTGCATCTGTATTGCTTCCACAAGCAGCGACT.....................AAAA ste TT.............................ATCTCCATCCCTTTTTTCAAGC......C -120 -110 -100 -90 -80 -70 sub GCGTTTTCTTTTATTACAAT-GAGGTAAAGTATATTTATTAGAACGATGAGGAGAGATGT hal GTGGATTCATTTGCTAAGCTAGAGGTAAGAACTATTT....................... ste CCCTTATCTTTTAT.............................................. -60 -50 -40 -30 -20 -10 sub TC hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...