Similar regions between promoters of ylaK
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TCTTGAGTTGTGTCCTTTACGTGAATCGGTTTAGTCTCCTGCTGTCTTGTTGATTCTTTT hal ........................ATTGGTTTCAGATCTTTC-GTCTAACTTGCTGTTTT ste .............................................CTTCATGATCGTTTC -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TCAACATTCTGGCCCTGTTTTCCTTGTTGATAGGCACAAGCGGACAGGATAAGTGTCAGC hal TGCACATAC................................................... ste CAAACGTGCAGCCGCTG......TTTTTGACGCGCACGAGTGAAC............... -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<< sub TGTATGATAATGAAAAGAATTCGCACTTGCGGGTTCCCTCCTTAAAATGCTTTCATTAAT hal .GTATGATGAAGAA.............................................. ste ....TGAAAATCAAAAG........................................... -180 -170 -160 -150 -140 -130 sub TTTATTGTTGAATTAACCTTCTATCTTTATGCACAAAAACATATATTTTAG--CAGGCAT hal .......................TGTTTTTGCACATACAACTAG-TACTAA--CAGCTAA ste TTTAGTTTGCAAATGTCCTTCTATCTTTATACATGTTTTCATATGTTGTATTACAGCCAT -120 -110 -100 -90 -80 -70 sub TCACCTTTTTCATCAAAAGAGAAGCAGGAAGAACTTTGACCCTTATATCAGGAGGCTGAG hal CCACATCTT..........AGAAGCAGCA.......TGATACTCCAGTCAGGAGGCGGA. ste TCCCATC------CAACGGAAAAACGTGAAAAACT......................... -60 -50 -40 -30 -20 -10 sub AC hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...