Similar regions between promoters of ypjP
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>]]]]]]]]]]]]]] sub CAGCACTGTTCCATTATGGCGTCATTCAAACAAGCCCGTGATTCATATCACGGGCTTTCT hal ............................................................ ste ...............AAGGCGCTCATCGACCAAGCCGGCG.................... -300 -290 -280 -270 -260 -250 sub GTTAATCGGTGACCTCCATGACGACAAAGTATAATAATGTTAAGAGTGAAACTGTGGCAA hal ............................................................ ste ...ACTCGCTGACATC...GTCGCCAAATTAAAA.......................... -240 -230 -220 -210 -200 -190 sub ACAGAGCGTCAATCATGCGGAAAGCCTCCTTTCATGAAATATTGTAAGCGTTTTTACACA hal .............................TTTCATGAAATTTTCTAAACGTTTTTCATGA ste .........................................TTGTTCGCGTCTTT..... -180 -170 -160 -150 -140 -130 sub AAGTGCATAGCAACGAATCTCCTAATTTGCATATCAGTTTCATATAGTACATGACTTGCA hal AAGGGCGTAG.............AATTGTAATAGTATTTTCATAGCTTTCATGA..TCCA ste .........................................................GCA -120 -110 -100 -90 -80 -70 sub TGTTTTGGATGTGCTAAA-ATAAGAGAAACATGACAATAAAATAGAGAGGAATAAGCAGT hal TTTTTTGGATATTTAAAGGATAAGAAAAAC.............................. ste TGTTCGTG-TGGGCGAAA-AT....................................... -60 -50 -40 -30 -20 -10 sub C hal . ste . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...