Similar regions between promoters of ypuF
<<<<<<<<<<<<<<<<<<<< sub TTCACTTGATATTCTTCCATCATCTCACCATTTTCAAGTATCACTCTCATTGCCGGAAAA hal .......................CTCAAACGTATCAAGTTTTACACT............. ste ....................CATCCCACCATTTT.AAATATCAATTTCATAGCGG..... -300 -290 -280 -270 -260 -250 sub ACTGGCTACCCTATAGTATAAGCCACCAAAAAGCTCTCGTCCAATACTATTTCATATCCT hal ...............................................TATGCCATATATT ste ...................AAGCCGCCAAA....TATCGTAAATATCAATTTCATAGC.. -240 -230 -220 -210 -200 -190 sub GTTTTGAAGGAGTTTGTACAGAATATTCAAAACACAAGAGGTGTTTGCTCGGAGCGCAGA hal GTTCTGTA.................................................... ste .................................................CGAAGCGGCAA -180 -170 -160 -150 -140 -130 sub AGCGGGAGAAAA--AGCCTTTGCTTCTGGTTTTCCTTTCTAAGAAGCACTAGAGGCCGGG hal ............................................................ ste AGCGAACGGAAAGCAGCCTCTTTTTTTG.........................GGCGCGG -120 -110 -100 -90 -80 -70 sub CGTTCTTTTTTCCTTTTATCCCTTCTATGGTACACTAAAAGCACATTAAAGGAGGAAGCA hal ...TCTACTTCCGCTTGATTAATTAAATGTAACAGTAAA..................... ste CCTACTTTT...........................AAAAGCAGATCAA........... -60 -50 -40 -30 -20 -10 sub CC hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...