Similar regions between promoters of ypuG
<<<<<<<<<<<<<<<<<<<< sub ATATAAGCTTTCGGATACAAGGTGCTTCCTCCTTT-AATGTGCTTTTAGTGTACCATAGA hal ....AGGCTTTCGCCTGCCTGGTGGGTCTTGCTTCCAACGCTCTTCTAG........... ste ATATACGCTTTTGGATACATCGGCCATCGTTCCTT......................... -300 -290 -280 -270 -260 -250 sub AGGGATAAAAGGAAAAAAGAACGCCCGGCCTCTAGTGCTTCTTAGAAAGGAAAACCAGAA hal ............................CTTCTAGCACTTCATGGCATTCAAA....... ste ..............AAAAGTAGGCCGCGCC.........................CAAAA -240 -230 -220 -210 -200 -190 sub GCAAAGGCT--TTTTCTCCCGCTTCTGCGCTCCGAGCAAACACCTCTTGTGTTTTGAATA hal ..........................................................TA ste AAAGAGGCTGCTTTCCGTTCGCTTTGCCGCTTCG.......................... -180 -170 -160 -150 -140 -130 sub TTCTGTACAAACTCCTTCAAAACAGGATATGAAATAGTATTGGACGAGAGCTTTTTGGTG hal TTCACTCCACTCTATCTAAAAAC................TTGGATGAGCGC......... ste ............TCCTCCAAAA...............................TTTGGCG -120 -110 -100 -90 -80 -70 sub GCTTATACTATAGGGTAGCCAGTTTTTCCGGCAATGAGAGTGATACTTGAAAATGGTGAG hal .............................GGCATTCAAAGTAAT-CTCGAAATCCGTGAA ste GCTT.............................................AAAATGGTGGG -60 -50 -40 -30 -20 -10 sub ATG hal A.. ste ATG -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...