Similar regions between promoters of yqfT

<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GGGTTTGACATAAAGAGGTGGTCTAAAATAAGAGATACACCGATAATCCCGCCATCAATA hal ...TTTGGCATATAGTGTTG........................................ ste ...............AAGTAGTCCAGAATCAGCGATATGCCAATGATGCCGCCGTCGATC -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAATCATTGGGGATTAAAAATAATTCAATACTTACAGCCGCAGATGCAGCTCCTACCAGA hal ...........................................................A ste ATTTTGTTTGGAACGAGCAGCCGCTCGATGGCAAACGCCGCCAAAGAGGCGGCGATGGCG -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ATCATAAAGACCCTGAAAATAAAATGGGTAAATGTTTCTTTCTTATGTTGTTTTGTTGGG hal ATCATAAAGCCC......................TTTTTTGCTCTATTTGTTTTATT... ste ATCATCAACACCCGATACAACACATGGCCTAGCGGTTCTTTTTTATGCTGTTTTG---GC -180 -170 -160 -150 -140 -130 <<<<< sub GTCATAAAATCTCC-TTTCCTGCAATAACTATTTTAAATACATTATAAATCTATTTTACC hal .......ATTATAC-TTTCATAGCATAATTATTC-AAATAC................... ste GCCAAACTACCACCCTTTCCCTTTTTGTTTTTTTCCATTATACCATACA-CGCCTTTTCC -120 -110 -100 -90 -80 -70 sub ATTAAACACTGACACATTTTACTGATTTGCCCATACATTAAGTCTGGAGGTGGAATGACC hal ............................................................ ste ATTCA...........TTTTTTCCATTATACCATACA....................... -60 -50 -40 -30 -20 -10 sub G hal . ste . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...