Similar regions between promoters of yqhL
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GGGGGGATTTTCTTTTCGCTGTGCCAATATAAAAGCGCTTCATCAAGCGCCATATTGAAT hal ..............TTCACTATGCCAATTCAATAGCGCTTCGTCAAGCGCCATGTTATAT ste ..............................AGAAGCGCCTCATCGAGCGCCATATTGAAC -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GCAGGACTTGCATTGCCTGAGTCTATAAACCGCCAAGTTTCTTTTTGCATTTTAAGACCT hal GCGGGATCACGATCTCCTGAGTCGATAAAACGCCATGTTTCCATTATCAT..TAAGACCT ste GCCGGCGGGCAATAGCCGGAATCGATAAAGCGCCATACTTCTTTTGCCATCGTTCCACCT -240 -230 -220 -210 -200 -190 sub TCCTTA--CCGTTTTAATAGAATCAGTTTATCAAACTGTCGGGAAAATGGAAAATATTTT hal TCACTATGCCAATTCAATAGAATAAGTTTAACAAACT....................... ste TCTCTA--TTGTT........ATTAGTTTAGCAAAC........................ -180 -170 -160 -150 -140 -130 sub AGTTCCATTATAGATGACAATCACGCTGTGCTTTACTATAATAGTATTTGTCGAAAACGG hal ..TTCCATTAT................................................. ste ........................GCGGCGACTTTATATAATAGGA.TTGTCGACCACCG -120 -110 -100 -90 -80 -70 sub CTCTATGACCTTGTTTTATG--AAGCAGGGTTTTGATTTTATATGCTAAAGGAGTAGAAT hal .......AACTTGTTTTCCGCTATGGAATGATTGCGATTTTTGTGAAACATGATTATAAT ste C.......................GCGGCGACTTTATATAATAGGAAATAGCAGACGAAG -60 -50 -40 -30 -20 -10 sub CACA hal CA.. ste C... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...