Similar regions between promoters of yqjP
sub TCCCCGTAACGCGGGAAACGTTTAGGTTTTCCTAACCGCGACTTGAGGGCAGGTTCTACA hal ...........................................................A ste ...........CAGGAAAGGTGCTCTTTTTTCTA.......................... -300 -290 -280 -270 -260 -250 sub AACAAGCGGGCCGCAACACCTTTCAGCCGGGGGTATCGCTCTCTTAGGCCATTGCCTTGT hal AAAAAGAGGGC................................................. ste AACACGCGTGATGAATAACTATTCA.................................GT -240 -230 -220 -210 -200 -190 sub ATACTATTCCTCGTCATAGCGTTCCAATGGTTCTCGTTTTAGTTTGTTGTTCATTATGCA hal ............................................................ ste GTGGTATGCTTGTTCATAGAG....AAAGGTGCTCTTTTTTCTATGCTTTTCAT...... -180 -170 -160 -150 -140 -130 sub ATGGCGGACAAGCTAATGTCAATAGCTTTTTCAAAAAGGTTTGTTCTCATTCTGCAATAA hal ...........................TGTTTAACAAAATTTGTT............... ste ....................................AGGTTTGTT............... -120 -110 -100 -90 -80 -70 sub TGACACAAGACCGAGAAAAAGCTAAAATATGAATAATGAATGAAGACAAGGAGCGAAAGG hal ............................ATGGAGAATGAATGAGGAGGAG.......... ste ........................AACTATTCATTTTGACTGATGAAACGGTTCGAACGG -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...