Similar regions between promoters of ywfN

<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TCCGGGTCCACTTCTTTCAAACGCGGCAGCAATGTTTTGATATTAGTGGCTTGGCAATCA hal ...............................ATCTCTTCATATTCTTGG.TTGGCTATAA ste TCCGGATCCAGCTTTTTGAGGCGCGGAATCAATGTTTTTAAATTCGGCGCCTTGCAGTCG -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<< sub TCACACACTCGAAATTCATTAGCCATGACGTACGCTTCCCTTCATTTCTATGTTCATCTA hal ATATCCACACGA............................................TCTA ste TCGCAAACGCGAAACTCATTCGCCATCAC-TCGTCATCCCTT.................. -240 -230 -220 -210 -200 -190 sub TGTGAATAACCTAAAATCACG--TTTCAAAAAAAATCACATCACACTTCATTTTACAAGG hal TGAGAAGCTTAGAAAATCAACATTTTCAAAAGAAAGC....................... ste ......................................CATCACTCGTCAT......... -180 -170 -160 -150 -140 -130 sub ATTCGACTGTTCCTGCAAGCCGCTCCATCCTTCGTATCTCCTATTCTTTCAGCCAATTTG hal ................................................TTAGCAGATGTC ste ...........................................................G -120 -110 -100 -90 -80 -70 sub TATAAATATTTTCCAACCTGGACATTCTAATACCATGAAAAGAAAAATGGGAGTTGAGAT hal TATGAGAAGCTTAGAAAATCAACATTTTCAAA...TCAAAAGAAAGCTAGCATTT..... ste TATAATTTTTTTCCTTTTGGTCCACCCTTTTACTAGCATGGGAAAAA--GGAGTGGAGA. -60 -50 -40 -30 -20 -10 sub AA hal .. ste .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...