Similar regions between promoters of yxkF
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AGATGCTGTTGTGATCACAGACTGGTCATACGGATTCAAAATGTCCTCCGTACGTCCGCT hal ......................................AAAAGTCTTCGACTCGTTCACT ste .........................................TTTCCCGCTTTCATCCATT -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TTCTCCCCCAGTCCATTTTCCGTTGATAAAACTTTTGTTTAACGTTTCGAAACTCATAAG hal ................TTTCCGAAAACAAAAGTCTT...................AAAAG ste TTGTCTTTCTTTCCATT..............CTTTTGTTTTATG................ -240 -230 -220 -210 -200 -190 sub ATGACCCTCCTTTGGTCCTGCATGTCTTC--TTCTATTTCCGCTGAA--GCCAATATGTA hal AGGAACCACC...........AAGTCTTC--GACTCGTTCA-CTGAA--GC........A ste .....CCCGCTTTCATCCATTTTGTCTTTCTTTCCATTCGCGGGGATTTGGTATAATGAA -180 -170 -160 -150 -140 -130 sub AACGAATGAGGTTTCCCTTTCAGTTTCTCGTCTATCTATACCGGATATACTCTTTTTTAG hal CACACATGCGGGTACCATTGAAGAAGCACGT............................. ste AAC-AACGCCGATTCCTCTTCGGCGTGACATC-ATCCTTGACGGAAA............. -120 -110 -100 -90 -80 -70 sub TGGAGAACATGTGTGTTTCGCCTTATACTGAATATACAGATCCTTACATAAGAGAGGAGA hal ..........................ATTGAAGAAGCACGTTCGTTAGAAAAAGAGGA.. ste ............................................................ -60 -50 -40 -30 -20 -10 sub CTCT hal .... ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...