SigF

We searched for SigF binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for SigF.

Transcription Factor Regulated gene organism position cis-element score
SigF sigG Bsu -65..-36 GCATATTTTTCCCACCCAAGGAGATACTT 7.422520
SigF sigG Cac -62..-32 GTATAAAATAGCTCCCCTGAGGGAATAATT 9.233520
SigF sigG Nos -101..-70 GTTTATTCAGGCGCTACTAAGGAAAATAATG 8.691190
SigF dacF Bsu -59..-30 GTATAAAACCATCACGCTTGGAAAAAATA 10.745770
SigF dacF Bha -118..-89 GTATAAAAAGTTCATGATAGGAAAAAATG 10.792470
SigF dacF Cac -65..-94 GTTTAAAAAAAACTGTTATGTCAAAAATA 8.627060
SigF dacF Spy -256..-228 TCATAAAACTTTCTTAAAGAAAATAATG 7.395410
SigF spoIVB Bsu -92..-62 TTATAAATAAGCCGTCAGAAGGCAAAATTA 8.578740
SigF spoIVB Bha -85..-55 TTATAAACGTGAGCTCGAAAGGCAACATTA 8.281520
SigF spoIVB Cac -74..-44 GCATAATTAAATTTTAAAATGGGAAATTTA 8.143130
SigF spoIVB Spn -70..-39 GCTTAGTGATAGAAGAAAATGGGGAAATATG 8.326340
SigF lonB Bsu -82..-52 GTTTATTCCCGTCTTCTATGGGAGATACTA 8.858090
SigF ywhE Pae -146..-177 GTTTGCACTGTCACCCCTTCCCGCCATAATG 7.508420
SigF ywhE Hin -101..-73 TTATAGCACGATTTCTAGGAAAAAACTG 7.582380
SigF ywhE Mlo -127..-158 GTTTGTCGACGAGAGGGCAGGGGCAACCATG 9.015820
SigF spoIIQ Bsu -49..-19 GTATATATTTTCAGAAAAGTGTTCAGAATG 7.307840
SigF spoIIQ Bha -48..-18 GTATAGTTTTAGCGCAACCTGATCAGAATG 7.669350
SigF spoIIQ Sau -38..-9 GTATATTGAGAAATAAACAGGTAAAAAGG 8.634610
SigF spoIIQ Vch -125..-153 GTATAGTGTACGTTCATAGGTAAAAAAA 7.845050
SigF spoIIQ jHp -114..-85 GCATGACTTTATTGGGGTGGGTAAAAATT 7.891850
SigF spoIIQ Syn -254..-224 GCCTAAAGTTAATGGTCTAGGAGAATACTG 8.522010
SigF spoIIQ Aae -282..-251 GTTTAAGTACCGCTCCGGAAAGGTAAAGCTG 9.018140
SigF katX Bsu -203..-172 GCTTGTTTCGCAAATAGAGAAGGAAAAATTA 8.419280
SigF katX Bha -103..-74 GTATAGAACCTTAAGTCAGCGACAAACTA 8.361930
SigF ytkD Bha -48..-77 GTATAACATACCGTATTTAAGAAAAACTG 7.558250
SigF ytkD Spy -19..-50 GTTTGACTCATCACACCTCTAGGGCTTACTG 7.884430
SigF ytkD Sau -31..-3 TTATAAAAATAGTAATTAGGGAGAAATA 7.463860
SigF ytkD Lin -85..-116 GTATATACAAGTTAAAAAGGAGGAAATTTTA 8.036350
SigF ytkD Vch -213..-182 GTATAGCTTATGATGCGAAGTGTTTAAAATA 7.287200
SigF ytkD Hin -173..-142 GCTTATTTTGTAAAAATGGAGTGAAATACTG 7.476430
SigF ytkD Xfa -139..-169 GTCTATGCGTGGCGTGGTTTGTCAAAGATG 7.505920
SigF ytkD Rso -43..-15 GCCTGTGTTGCCGTCCGCGGCAACGCTA 8.042540
SigF ytkD Nos -249..-220 GTCTGGACTGAGAAACTGGGTAAAAACTA 7.370460