SigK

We searched for SigK binding sites in the upstream region of orthologous genes using the Position-Specific Scoring Matrix for SigK.

Transcription Factor Regulated gene organism position cis-element score
SigK ykvP Cac -88..-116 CACCCTACTTACGAATAGTCGTAAGATT 7.572510
SigK ykvP Lla -64..-35 AACAATAAAAATACAATTGGCATATTTTA 7.861490
SigK ykvP Lin -85..-56 TACAATTTGTCGATAACAGTCATAAGATA 8.378540
SigK ykvP Cgl -195..-225 CACAATAATCAGAAAACAATAAATAAGCTG 7.639800
SigK ykvP Pmu -46..-76 TACCTTACTTTTCATCGATTACATAGTCTA 7.440370
SigK ykvP Cac -88..-116 CACCCTACTTACGAATAGTCGTAAGATT 7.572510
SigK ykvP Lla -64..-35 AACAATAAAAATACAATTGGCATATTTTA 7.861490
SigK ykvP Lin -85..-56 TACAATTTGTCGATAACAGTCATAAGATA 8.378540
SigK ykvP Cgl -195..-225 CACAATAATCAGAAAACAATAAATAAGCTG 7.639800
SigK ykvP Pmu -46..-76 TACCTTACTTTTCATCGATTACATAGTCTA 7.440370
SigK ykuD Bha -60..-32 CGCAACTTCACTCTATTCGCATAACGTA 7.506210
SigK ykuD Mtu -99..-70 CACCACCCGTTGGTGCGGTGCGTACGGTA 8.056960
SigK ykuD MtC -99..-70 CACCACCCGTTGGTGCGGTGCGTACGGTA 8.056960
SigK cotH Ccr -47..-17 AACCTTTAGTCTTTCAACCTACATACCCTT 8.184890
SigK cotF Bsu -62..-34 AACAACATTGAGCGTTGGGCATATGCTG 9.369210
SigK cotF Cac -170..-198 AACAAACTTTAGAAAAGTGAATATGATA 7.455590
SigK cotF Xfa -89..-59 TACAATTATGAACGATAACCACATACACTA 8.078310
SigK cwlC Bsu -45..-17 AGCAGAAGCCGTGTTTTTTCATATCCTG 7.650010
SigK cwlC Bha -165..-193 CGCAACTTCACTCTATTCGCATAACGTA 7.506210
SigK cwlC Pmu -46..-76 TACCTTACTTTTCATCGATTACATAGTCTA 7.440370
SigK cwlC Nme -7..-35 CTCCAAAAAATATTGATTGCATATAGTG 7.878810
SigK cwlC NmA -7..-35 CTCCAAAAAATATTGATTGCATATAGTG 7.878810
SigK cwlC Nos -256..-284 CACATCTTATCAGTAGACAAATATGATT 7.577200
SigK yfhP Bsu -149..-120 CACAGTACGATAATATGTTACATTAAATA 7.276800
SigK cotM Bsu -43..-15 ACCCATTTATACTCCACCGCATATGATG 7.265520
SigK cotM Eco -182..-154 CTCAGTCTATGCAATAGACCATAAACTG 7.537290
SigK cotM EcZ -182..-154 CTCAGTCTATGCAATAGACCATAAACTG 7.537290
SigK cotM Ecs -182..-154 CTCAGTCTATGCAATAGACCATAAACTG 7.537290
SigK cotM Mlo -13..-42 CACTGTCCTCTCAAGAGCGACATAAACTG 7.466450
SigK ftsY Rpr -128..-99 TGCACCTAATCAACAATCTACATATGGTA 7.381770
SigK ftsY Rco -163..-133 TACCTAATCGTCATTGCGAACCATAGGCTG 8.384810
SigK yoaN Bsu -63..-34 CACAGCAATCTAAGATTCTGCATAGGCTG 9.390720
SigK gerE Bsu -95..-66 CACCTCCTGCGCCCTTCTTACATATGATA 10.279390
SigK gerE Bha -111..-82 CACGTGTCTGATTTTCATCACATATACTA 7.904380
SigK gerE Ype -78..-106 AACCAGACACACTCCTATGCATACAGTA 8.417910
SigK gerE Atu -163..-193 CACCAAAAATTATGGTTCAAAAATACGCTT 7.532900
SigK spoIVCB Bsu -69..-40 CACAGACAGCCTCCCGGTCACATACATTT 8.137760
SigK cotA Sty -80..-52 CTCCAAATTGCTAACGAATCATAAGGTA 7.954760
SigK cotA Nme -267..-239 CACATATAAAACAAATACATATATGATA 7.282360
SigK cotA NmA -266..-238 CACATATAAAACAAATACATATATGATA 7.282360
SigK spoVK Bsu -50..-22 CACAATCGGCATCCGCTTGAATATCATA 7.581950
SigK spoVK Mtu -20..-48 TGCCCCGAAGTTAGCATTGCATAAGCTA 7.432150
SigK spoVK Mle -118..-146 CACCCAGTGCACCTTACTGAATACGATT 7.530420