Regulated Operon: gerD

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
gerD
- 158514..159071

gerD-BAC  

Operon evidence: upstream and downstream genes are transcribed in the opposite direction
Reference: Yon JR, et al. (1989)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -39:+20 159080..159138 GTTATGTATAATTCCAAACAGATGAATCATATTAAAGGTAAGACAAGTATGTGAAAGGA Kemp EH, et al. (1991): RG DB OV PE RO
SpoVT Positive ND ND ND Bagyan I, et al. (1996): DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ATAAAGGGAAAGCCGGGATCTGGAATCCCGGTTCACCTTTTATACCTGCACT
     >>>>>>>>>>>>>>     <<<<<<<<<<<<<
158481..158512
2..33
-17.6
gerD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai