Regulated Operon: glnQHMP

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
glnQ
+ 2801585..2802313 glutamine ABC transporter (ATP-binding protein) COG1126 glnQ-BAC-1 glnQ-LAB glnQ-STR  
glnH
+ 2802335..2803156 glutamine ABC transporter (glutamine-binding protein) COG0834 glnH-BAC  
glnM
+ 2803217..2803867 glutamine ABC transporter (integral membrane protein) COG0765 glnM-BAC  
glnP
+ 2803884..2804540 glutamine ABC transporter (integral membrane protein) COG0765 glnM-BAC glnP-LAB glnP-STR-1 glnP-STR-2  

Operon evidence: Northern blotting (3.0 kb transcript)
Reference: Yoshida K, et al. (2003), Genbank Z69371
Comments: The readthrough terminator downstream of glnH leads to a 1.8 kb transcript.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
TnrA Positive ND 2801106..2801122 GGGTATATTTTCTGACA Yoshida K, et al. (2003): AR HM GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GAAAAGGATACTCTTTGGAGAGTATCCTTTTTGCATTAAAAC
     >>>>>>>>>    <<<<<<<<<
2804545..2804566
5..26
-13.4
glnP
ATCCCGGGATGAGCAGGCGATGCTCATCCCAATTTGATAAGGAGTGA
     >>>>>>>>>>     <<<<<<<<<<
2803167..2803191
11..35
-22.7
glnH

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai