Regulated Operon: maeN

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
maeN yufR + 3243814..3245160 Na+/malate symporter COG3493 maeN-BAC  

Operon evidence: Northern blotting (1.35 kb transcript); downstream genes are on the opposite strand
Reference: Tanaka K, et al. (2003)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -40:+12 3243747..3243798 TTAAAAAAATATGAAGTGTTAACGCTTTCTTGTAGACTGTAACAAACAATAC Tanaka K, et al. (2003): PE
YufM Positive -86:-23 3243711..3243764 GACCCCCTTAATTTAATTGTTTATTAGTTTTTTAACTTAAAAAAATATGAAGTG Tanaka K, et al. (2003): RG NB PE FT

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AGAAAGAGTTCCGTTTTATGCGGAACTCTTTTTTTATTTATTC
     >>>>>>>>>     <<<<<<<<<
3245168..3245190
8..30
-15.8
maeN

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai