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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | mtnKA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ykrT | mtnK | - | 1422549..1423748 | COG4857 | ykrT-BAC | |
| ykrS | mtnS, mtnA | - | 1421480..1422541 | COG0182 |
| Operon evidence: | lacZ assay; RT-PCR; downstream genes are on the opposite strand |
|---|---|
| Reference: | Sekowska A, et al. (2001) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -49:+20 | 1424010..1424078 | TTAAAAAATATATTGACAACTAACTAAATTACCTGTTACCATGTTCATCAACTGATAAATTAGAATTGT |
Sekowska A & Danchin A (2002): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TGCATTAAAAAACCGCTGGACTTTGCTCATTTGGAGCCGAGTCAGCGGTTTTTTTGTTTCTTT >>>>>>>>>>>>>>>> <<<<<<<<<<<<<<< |
ykrS |
|