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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | mtnU |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ykrU | mtnU | - | 1424075..1424854 | COG0388 |
| Operon evidence: | RT-PCR; upstream genes are on the opposite strand |
|---|---|
| Reference: | Sekowska A, et al. (2001) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -55:+15 | 1424870..1424939 | CCTTCTAAAAAAATCTTGAAATGATAGTCCATCATCATATATGGTTAAATGAAAAAAGTAAAGAAAAATT |
Sekowska A & Danchin A (2002): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAACCGACCGTAATTCCATTGTGAAATGGGGCGCATTTTTTTCGCGCCGA >>>>>>>>>>> <<<<<<<<<< |
ykrU |
|