Regulated Operon: odhAB

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
odhA citK - 2107986..2110811 2-oxoglutarate dehydrogenase (E1 subunit)
odhA-BAC  
odhB citM - 2106717..2107970 2-oxoglutarate dehydrogenase complex (dihydrolipoamide transsuccinylase, E2 subunit) COG0508 odhB-BAC-1 odhB-BAC-2 odhB-STA citM-BAC  

Operon evidence: Northern blotting (4.3 kb transcript)
Reference: Condon C, et al. (2002), Genbank M27141
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -48:+16 2110909..2110972 TTTTTTACTATTTTGTGAACAATCAAGGTAGAATCAAATTGCAAACAGTGGTAAAATATCGTTG Resnekov O, et al. (1992): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGGGTACATCACGATAAAGTGATGTACCCTTTTTGATGCATATT
     >>>>>>>>>>>      <<<<<<<<<<<
2106682..2106709
8..35
-21.3
odhB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai