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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | pst |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| pstS | yqgG, yzmB | - | 2579947..2580849 | phosphate ABC transporter (binding protein) | COG0226 | pstS-STR x0764-BAC |
| pstC | yqgH, yzmC | - | 2578949..2579878 | phosphate ABC transporter (permease) | COG0573 | pstC-BAC x1206-BAC |
| pstA | yqgI, yzmD | - | 2578065..2578949 | phosphate ABC transporter (permease) | COG0581 | pstBA-LAB |
| pstBA | pstB, yqgJ, yzmE | - | 2577235..2578044 | phosphate ABC transporter (ATP-binding protein) | COG1117 | pstBA-BAC pstBA-BAC pstBA-CLO pstBA-LAB pstBA-STA pstBA-STR |
| pstBB | pstB, yqgK, yzmF | - | 2576442..2577224 | phosphate ABC transporter (ATP-binding protein) | COG1117 | pstBA-BAC pstBA-BAC pstBA-CLO pstBA-LAB pstBA-STA pstBA-STR |
| Operon evidence: | Northern blotting (4.4 kb transcript) |
|---|---|
| Reference: | Allenby NE, et al. (2004) |
| Comments: | mRNA produced by this operon is rapidly degraded, except for pstS |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PhoP | Positive | -66:-15 | 2580906..2580956 | CACTGATTTACAAAACCTTAACATTCGGTTCAAACCCTTTTTACATAGAAC |
Liu W, et al. (1998): DP GS FT Qi Y, at al. (1997): PE RG Allenby NE, et al. (2005): DB AR |
| SigA | Promoter | -42:+7 | 2580884..2580933 | TTCGGTTCAAACCCTTTTTACATAGAACCTTTACTCTATACGTGTAGGAC |
Qi Y, at al. (1997): PE RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACAGGCTGAGTCAGCCTGTTTTTTTATCGTGTT >>>>>>> <<<<<<< |
pstBB |
|