 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | rpmH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| rpmH | - | 4214279..4214413 | ribosomal protein L34 | COG0230 | rpmH-BAC rpmH-MYC rpmH-STA rpmH-STR |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Moriya S, et al. (1985) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -49:+23 | 4214428..4214499 | ACTAGTGAAGTTGACAATGAATAGGTAACGCAAATATAATAAGTAAGACTGTCTTTAACAGCTATTCCTCGA |
Ogasawara N, et al. (1985): S1 |
| SigA | Promoter | -41:+10 | 4214510..4214560 | AAATAAGGTTTCGAAAGTTGAAAAGGTATGGTATCCTATTATGGTTGCAAG |
Ogasawara N, et al. (1985): S1 |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GCTTAGGCCACTGAATAATGTCAGTGGTCTTTTTTCACGTTATG >>>>>>>>> <<<<<<<<< |
rpmH |
|