Regulated Operon: spoIIP-yqxA

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
spoIIP
- 2632460..2633665

 
yqxA yqeP - 2632105..2632443

 

Operon evidence: Genome analysis
Reference: Frandsen N & Stragier P (1995), Homuth G, et al. (1996), Genbank D17650
Comments: Terminator sequence differs slightly from the sequence indicated in Genbank.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -40:+4 2633684..2633727 ACAGTTCTACTTCCTCTAGCTTGTTCATAGAGTAATTACTAGAC Frandsen N & Stragier P (1995): RG PE DB OV
YlbO Negative ND ND ND Eichenberger P, et al. (2004): AR DB RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GATATGATAGGGAACTTTTCTCTTTCTTGTTTTACAT
     >>>>>    <<<<<<
2632060..2632074
31..45
-4.8
yqxA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai