Regulated Operon: spoIVFAB

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
spoIVFA bofB, spoVL - 2856058..2856852
COG0739  
spoIVFB
- 2855199..2856065 membrane metalloprotease COG1994  

Operon evidence: transcriptional fusions
Reference: Cutting S, et al. (1991)
Comments: The transcriptional fusions show that the transcript does not extend more than 74 base pairs from the spoIVFB stop codon.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -46:+6 2856877..2856928 TTCTTGACTAAACCGAATATTTGCCATGGACAAGACATATGATGTACAAACC Cutting S, et al. (1991): PE RG
SpoIIID Negative ND ND ND Eichenberger P, et al. (2004): GS AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CTAAAACTGATTGACAAACGCCTTGTATTTTGGTATATTTTTTAATGTTATG
     >>>>>>>>>>>>     <<<<<<<<<<<<
2855169..2855197
2..30
-9.1
spoIVFB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai