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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | spoVK |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| spoVK | spoVJ | + | 1873398..1874366 | COG0464 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Foulger D & Errington J (1991) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -40:+3 | 1873228..1873270 | CATGGTTTGTCCACCCCATGTCCGTGAATACAATAAGAAATAA |
Errington J, et al. (1989): RG Foulger D & Errington J (1991): PE RG |
| SigK | Promoter | -42:+5 | 1873339..1873385 | GGCGTTTGTCACAATCGGCATCCGCTTGAATATCATATAGAGAGAAC |
Foulger D & Errington J (1991): PE RG DP DB |
| SpoIIID | Positive | ND | ND | ND |
Eichenberger P, et al. (2004): GS AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CTGCATAGACCTCTCAGTTTTTGAGAGGTCTGTTTTTTGCTCGTATT >>>>>>>>>>> <<<<<<<<<<< |
spoVK |
|