Regulated Operon: sspN-tlp

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
sspN
+ 1929473..1929619 small acid-soluble spore protein
 
tlp
+ 1929656..1929907 small acid-soluble spore protein (thioredoxin-like protein)
 

Operon evidence: lacZ transcriptional fusion to tlp
Reference: Cabrera-Hernandez A, et al. (1999)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigF Promoter -39:+3 1929419..1929460 GTATTCATGTTTACCCCTCCTTTTGAGAAACCTATCTGTTGA Cabrera-Hernandez A, et al. (1999): PE RG
SigG Promoter -40:+13 1929419..1929471 GTATTCATGTTTACCCCTCCTTTTGAGAAACCTATCTGTTGAGGAGGGATAAA Cabrera-Hernandez A, et al. (1999): PE DB OV RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCAGGGAAACCTGGTTTTTTTCTTTCTGA
     >>>>>    <<<<<
1929912..1929925
5..18
-11.0
tlp

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai