Regulated Operon: tagC

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
tagC dinC + 3682468..3683796

 

Operon evidence: Genome analysis
Reference: Margot P, et al. (1994)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
LexA Negative ND 3682365..3682388 AAAACAGAACAAGTGTTCTTTTTT Raymond-Denise A & Guillen N (1991): DB RG
Cheo DL, et al. (1991): DB RG DP
Lovett CM Jr, et al (1993): GS FT
Miller MC, et al. (1996): GS FT
Winterling KW, et al. (1998): GS
Au N, et al. (2005): GS AR DB
Groban ES, et al. (2005): GS
LexA Negative ND 3682395..3682418 AATACCGAACGTATGTTTGCTTTA Raymond-Denise A & Guillen N (1991): DB RG
Cheo DL, et al. (1991): DB RG DP
Lovett CM Jr, et al (1993): GS FT
Miller MC, et al. (1996): GS FT
Winterling KW, et al. (1998): GS
Au N, et al. (2005): GS AR DB
Groban ES, et al. (2005): GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TCAAATAGGCTGTAGCTATTTAATAGCTACAGCCTATTTGCAACTTTCTAA
     >>>>>>>>>>>>>>   <<<<<<<<<<<<<<
3683805..3683835
9..39
-24.7
tagC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai